Shewanella sedimentimangrovi: JYB85_05905
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Entry
JYB85_05905 CDS
T07846
Symbol
gndA
Name
(GenBank) NADP-dependent phosphogluconate dehydrogenase
KO
K00033
6-phosphogluconate dehydrogenase [EC:
1.1.1.44
1.1.1.343
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem00030
Pentose phosphate pathway
ssem00480
Glutathione metabolism
ssem01100
Metabolic pathways
ssem01110
Biosynthesis of secondary metabolites
ssem01120
Microbial metabolism in diverse environments
ssem01200
Carbon metabolism
Module
ssem_M00004
Pentose phosphate pathway (Pentose phosphate cycle)
ssem_M00006
Pentose phosphate pathway, oxidative phase, glucose-6P => ribulose-5P
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
JYB85_05905 (gndA)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
JYB85_05905 (gndA)
Enzymes [BR:
ssem01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.44 phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating)
JYB85_05905 (gndA)
1.1.1.343 phosphogluconate dehydrogenase (NAD+-dependent, decarboxylating)
JYB85_05905 (gndA)
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Gene cluster
GFIT
Motif
Pfam:
6PGD
NAD_binding_2
3HCDH_N
F420_oxidored
ApbA
UDPG_MGDP_dh_N
NAD_binding_11
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
QSX38356
UniProt:
A0ABX7R3G9
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Position
1407277..1408797
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AA seq
506 aa
AA seq
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MQQHAALADIGVIGLGVMGKNLALNIVDNGYRVAAFDLDQAKVEAAVSQAATEVPGRAQV
LVGCNNITELLASLSKPRLLLLSVPAGSPVDGVCDALLQAGIEADDIVIDTGNSLWTDTV
ARERHYQGKLVFFSSAVSGGEVGARFGPSLMPSGSEAAWQRLAPIWRAIAAKVDPQTGLP
LVRLEPGNPVREGEPCAAYIGPAGAGHYVKMVHNGIEYADMQLICEAYQLLSQVLGLSAT
EVADIFQRWNQGKLNSYLMEISAEVLRQQDPLSGKPLVEMILDKAGQKGTGLWTAVSSLQ
VGCPAPTIAEAVYARALSNQKPLRQTLATRLKGAEPMGQVEAEAFIADLEQALYCAKICC
YAQGFQLMAMHAKEQGWTLDFRAIASIWRAGCIIRATFLQSIMSAFEAEPQLSNLLLDER
FASALNQSQQAWRRLVSGAVLAGVPAPCITSALAYYDGYRCETLPANLLQGQRDYFGAHS
FERTDTPAGEKYHLNWSSPKRELVKL
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagcacgcagctctcgcagacattggggttatcggcctcggtgtcatgggcaag
aaccttgccctcaacatagtcgacaatggttaccgtgtggccgcctttgacctggaccag
gccaaggttgaggccgctgtttcccaggccgccaccgaagtgccgggtcgcgcccaagtc
cttgttggttgtaataatattaccgaattgttggcaagtctcagcaagcccaggctgctg
ctcttgtcggtgcccgccggcagtccggtggacggtgtctgtgacgccctgctgcaggcc
ggcatagaggccgatgacatagtcatagacacgggcaacagcctgtggacagatacagtt
gcccgtgaacgccattatcaaggcaagctggtatttttcagctcggcggtctccggcggt
gaagtgggcgcccgtttcggtccttccctgatgccgagcggcagcgaggccgcctggcaa
cgcctggctcccatctggcgcgccattgccgccaaggtggacccgcaaaccggtctgccc
ctggtgcgccttgagcccggtaacccggtgcgtgaaggtgagccctgcgccgcctacatt
ggccccgccggtgccggccactacgtgaagatggtgcataacggtatcgagtatgccgac
atgcagctcatttgcgaggcctaccagttgctgagccaggtgctgggcctcagtgccacc
gaagtggccgatatcttccagcgctggaaccagggcaagctcaacagttacctgatggag
atcagcgccgaagtgctgcgccagcaggatcccctgagcggcaaacccctggtggaaatg
atcctcgacaaggcgggtcagaagggcactggcctgtggacagctgtttccagtttgcag
gtgggatgcccggcgccgaccatagccgaggcggtttatgcccgcgccctgtcgaaccag
aagccgctgcgccagactctggcgacccgcctcaagggagcagagcccatgggacaggtg
gaggccgaagcctttatcgcggatctggaacaggccctgtattgcgccaagatttgctgt
tacgcccagggcttccagttgatggccatgcacgccaaagagcagggctggaccctggat
ttccgcgccatcgccagcatctggcgcgccggctgcatcatacgcgccaccttcctgcaa
tccatcatgtcggcctttgaggccgagccgcagctgagcaatctgctgctggatgagcgt
tttgcctcggcactgaaccagtcgcaacaggcctggcgtcgcctggtgtccggtgccgtg
ctcgccggagtaccggcaccctgcatcacctcggcactggcctattacgatggctaccgc
tgtgaaaccttgccggcgaacctgttgcagggccagcgggattacttcggtgcccacagc
tttgagcgcaccgataccccggcgggggagaaatatcacctcaactggagcagccccaag
cgtgagttggtaaaactctga
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