Shewanella sedimentimangrovi: JYB85_06380
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Entry
JYB85_06380 CDS
T07846
Name
(GenBank) DeoR family transcriptional regulator
KO
K02081
DeoR family transcriptional regulator, aga operon transcriptional repressor
Organism
ssem
Shewanella sedimentimangrovi
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssem03000
]
JYB85_06380
Transcription factors [BR:
ssem03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
JYB85_06380
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
GntR
HTH_PafC
HTH_Mga
HTH_AsnC-type
Rrf2
HTH_23
MarR
Sigma70_r4
HTH_28
DUF4732
Put_DNA-bind_N
FeoC
PaaX
CggR_N
HTH_24
Sigma70_r4_2
HTH_Tnp_ISL3
DUF6847
HTH_IclR
SCAB-ABD
FaeA
EAP30
HTH_Crp_2
HTH_36
Motif
Other DBs
NCBI-ProteinID:
QSX38442
LinkDB
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Position
1514344..1515126
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AA seq
260 aa
AA seq
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MNMLNTIERQQEIVRLTQQQGKVSVTELASRFGVSEVTIRSDLATLDQKQLLVRSRGGAM
VNSELSRELSLKEKGSCYSALKRELGAAAAALVQNGDRLLLDSGTTTEQVAHHLMQHEDL
IVMTNGLNIATVLAKSESVEVMLTGGLLRKKSMSFYGSSAEKSLGDYNFNKLILGVDGFD
LKAGLTTHFEKEASLNRMMVELATEVIVVTDSSKFDQQAFHVICGCRHIHRLVTDTGIPP
HYVEALEKLGVQLHLVERSQ
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgctcaacaccattgaaaggcagcaggagatagtgcgcctgacccagcagcag
ggcaaggtctcggtgaccgagctggcgagccgcttcggggtttccgaagtcactatccgc
agcgatttggcgaccctggatcagaagcagttgttggtgcgctcgcggggcggggccatg
gtcaacagtgagctgagccgagagttgtcgctgaaggagaagggcagttgttactcggcg
ctcaagcgtgagttgggggccgcggcggcagccctggtgcaaaacggcgatcgtctgctg
ctcgattcggggaccaccacggagcaggtggcccatcacctgatgcagcatgaggatctg
atcgtcatgaccaacgggctgaatatcgccactgtgctggccaagtccgagtcggtggaa
gtgatgttgaccggcggcctgctgcggaaaaagtccatgtccttctatggcagcagcgcc
gagaagagtttgggggattacaacttcaacaagttgatcctcggggtggatggcttcgac
ctcaaggccggcctgaccacccattttgaaaaggaagccagtttgaaccgcatgatggtg
gagctggccaccgaggtcatagtggtgaccgattcatccaaatttgatcagcaggccttt
catgtgatttgtggctgtcgccacattcaccgcctggtgacagataccgggatcccgccg
cattacgtggaggccctggaaaaactgggggtgcagttgcaccttgttgaacgaagtcag
tag
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