Shewanella sedimentimangrovi: JYB85_06770
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Entry
JYB85_06770 CDS
T07846
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
ssem
Shewanella sedimentimangrovi
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssem03400
]
JYB85_06770
DNA repair and recombination proteins [BR:
ssem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JYB85_06770
Archaeal homologous recombinant proteins
JYB85_06770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
QSX38510
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All DBs
Position
1598688..1599830
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AA seq
380 aa
AA seq
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MKFIHTSDWHIGRQLHNESLLDEQALMLQQIASLAAEHGVDALVVAGDIYDRAIPPANAV
ALLNRFLDTLLLELKIPVIMIAGNHDSHERLGFGARQMSGSGLHICGPLERHIKPVRIES
DSGAALFYPIPYAEPAMVRQLFEVEVSSHQDVMALLLDEVLGQNGDGLPKVVVAHCFLDG
GSGSDSERPLSIGGADRIDPMLFSAFDYAALGHLHGPQFKGSPHVRYSGSPLKYSFSEQH
QNKSVTLVELQAGQPAVIELLPLTPRRDVRIIEGYLQQLLEQAPTDPGREDYLMVRLLDT
QALLDPMGKLRSHYPNVLHLERTGLMARQASGDVERDRVQKGELDMFSDFFSQVQGEPMS
DAQRQLMTELIEALHREESR
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatccatacctcagattggcatattggccggcaactgcataatgaatcgctg
cttgatgagcaagcattgatgctgcagcagattgcctcactggccgctgagcacggggtg
gatgccctggtggtggcaggtgacatctacgacagggctattccgcctgccaatgccgtg
gccctgctcaatcgcttcctcgacaccctgctgctggagctcaagatccccgtcatcatg
atcgccggaaaccatgacagccacgagcgtcttggctttggcgccaggcagatgagtggt
agcggactgcacatttgtggaccgctggagcgtcatatcaagcccgtcagaatagaaagt
gattccggcgccgccctgttttatcccattccttatgcagaacccgccatggtgcgccag
ttgtttgaggttgaggtcagcagccatcaggacgtcatggccctgctgctcgatgaggtg
ctgggccaaaacggcgacggactgcccaaggttgtggtggcacactgttttctcgatggc
ggcagcggctcagactcagagcgaccgctcagcataggcggtgccgatcgtatcgaccca
atgctgttcagtgcttttgattacgccgctctgggacatttgcacgggccccaatttaag
ggctccccccatgtgcgctattcgggctcaccgctcaaatactccttcagcgagcagcac
cagaacaagtctgtaaccctggtggaattgcaagcggggcaacctgccgtcatcgagctg
ctgccgctgactcccaggcgcgatgtgcgcattattgaaggttatttgcaacagttgctg
gaacaggcaccaaccgatcccggccgtgaagactatctcatggtgcgcctgcttgatacc
caggcgctgcttgatcccatgggcaaactcagaagccattatcccaatgtgctgcacctt
gaacgcaccggactgatggccaggcaggccagtggtgacgtggagcgggatagggtgcaa
aagggcgaattggacatgttcagcgactttttcagccaggtccagggcgagcccatgagt
gatgcgcagcggcagctgatgaccgaacttattgaagcgctgcaccgggaggaaagtcga
tga
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