Shewanella sedimentimangrovi: JYB85_06975
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Entry
JYB85_06975 CDS
T07846
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem03030
DNA replication
ssem03430
Mismatch repair
ssem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JYB85_06975 (dnaX)
03430 Mismatch repair
JYB85_06975 (dnaX)
03440 Homologous recombination
JYB85_06975 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssem03032
]
JYB85_06975 (dnaX)
03400 DNA repair and recombination proteins [BR:
ssem03400
]
JYB85_06975 (dnaX)
Enzymes [BR:
ssem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JYB85_06975 (dnaX)
DNA replication proteins [BR:
ssem03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JYB85_06975 (dnaX)
DNA repair and recombination proteins [BR:
ssem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JYB85_06975 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
AAA_22
RuvB_N
AAA_5
AAA_14
PIF1
AAA_18
AAA_30
TsaE
ResIII
AAA_19
AAA_7
AAA_16
AAA_2
Motif
Other DBs
NCBI-ProteinID:
QSX38550
LinkDB
All DBs
Position
1636097..1638667
Genome browser
AA seq
856 aa
AA seq
DB search
MSYQVLARKWRPAKFEQVVGQSHVLHALTNALGQNRLHHAYLFTGTRGVGKTSLARLFAK
GLNCEQGITASPCGVCASCVEVAQGRFVDLIEVDAASRTKVDDTREILDNVQYRPSRGRF
KIYLIDEVHMLSKSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKSLSK
EQISQQLALILKAEGLPFEAPALELLAKAAQGSMRDALSLTDQAIAFGAGQVLREQVQTM
LGSVDTGQVINLLQALAQAEIAPLMQAASSALAFGADADELLRSLLELLHQISLSQFAPA
AAELSEHSEQVLAFAKALAPEQVQLYYQILLEGRKELPFAPDPRTGLEMTLLRAVAFIPQ
MPAKRWQKGEGVALDIPAATKTVSAAPVMADNAPTPPVAKPASVEAQMDQGAITPASQAD
VTDSHDSAHAPVQSSQADMPELDSGLWEDMDEANAALVAEQNLLLSQAESQGFAGEDMFG
FVPDEAPQEQLLPMQVTQAQQQVPELDAPQATAPLALGDDILDAVLAARDDLLSQLGSDV
AEEGDPKKSWQPLSRQREVVEAKSDSAESVITQDEPQLAAPAPTPAVTAPADEDRPPWEE
AAKPVVDAAAETSLPAEARAEAKAGAAIEPHLPVPQPEVPQPEVPLPAEQQPEATQAETK
QIEAKQTEAKQTAEKSQDGAGLPANPETASGTVNLSVPADLGDITGHQDDLRWYKLMSAL
DIGGRVRQLAVNSVCLDWSEPLQLVLKPDQKHLAAPIAITQLVESLGRALGHVTEVQVDV
GQVVGRETPLEIRQRFHQELLGQAQASLLADPNVNWLMTWAGAELQPDSLNYPGELLGAR
GRALPALPPLQQPQEA
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgtcttaccaggtgttagccagaaaatggcgccctgccaaattcgagcaggttgtgggt
cagtcccacgttctgcatgccttgaccaatgccctgggtcaaaaccgtttgcaccatgct
tacctgtttaccggcacccgcggtgtcggcaagaccagtctcgcccgcctgtttgccaag
ggattgaactgcgagcaagggatcactgcgtcaccttgtggcgtgtgtgccagttgtgtg
gaggttgcccagggtcgttttgtcgatctgattgaggtggatgcggcgtcccgcaccaag
gtggacgacacccgggaaatattggataacgtccagtaccggcccagccgcggccgtttc
aagatctacttgatagacgaagtgcacatgctgtccaagagcagtttcaatgccctgctc
aaaaccctggaagaaccccctgaacacgttaagttcctgctggcaaccacggatccgcaa
aagttgccggtgacagtgttgtcccgctgcctgcaattcaatctcaagagcttgtccaaa
gagcagataagtcagcagttggcgcttatcctcaaggccgaaggtctgccgttcgaggcg
cccgcgctggagctgctggccaaggcggcccagggcagcatgcgtgatgcccttagcctg
accgatcaggccatagccttcggtgcaggacaggtgctgcgcgagcaggtgcagaccatg
ctcggcagtgtagatacaggtcaggtcatcaatttgctgcaggcattggcccaggccgag
atagcacctctgatgcaggcggcgtcgtcggcattggcctttggtgccgatgccgatgaa
ctgctgcgttccttgcttgagctgctgcaccagataagcctgagccagtttgctccggcc
gccgctgaactgtctgaacacagtgaacaggtgctggcctttgccaaggcactggccccc
gagcaggtgcagctctattaccagattttgcttgaggggcgcaaagagctgcccttcgct
ccggatcccagaaccggactggaaatgaccttgctgcgtgccgtcgcctttatcccacag
atgccggccaagcgttggcaaaagggagaaggcgtggcgctggatataccggcggctacc
aagacagtatcggcagcgccggttatggccgacaacgccccaactcccccggttgccaag
ccggcaagcgtcgaggcccaaatggaccaaggtgcaataacaccagcgtcccaagccgat
gttaccgatagccatgattcagcccatgctcccgtgcagtccagtcaggcggatatgcct
gagcttgactcagggctatgggaagacatggatgaagcgaatgcagcgctggttgcggag
caaaacctgctgttgtcacaggccgaaagtcagggctttgccggtgaagacatgtttggt
tttgtgcctgacgaagcgcctcaggaacagctgctgccgatgcaggtgactcaggcccag
cagcaagttcctgaattggacgcgcctcaggcgacagcgccactggcattgggtgatgac
attctcgatgcggtactggcggccagagacgatctgctgtcacagttgggcagcgatgtt
gccgaggaaggtgacccaaaaaagtcctggcagccactaagccgtcagcgcgaggtcgtt
gaggcaaagagtgacagcgccgagtctgttattacgcaagatgagccgcagcttgcggca
ccggcaccgacaccggcagtaacagcccctgcagatgaagacagacctccatgggaagag
gctgcgaagcctgtggtggacgccgctgccgagacctcattgccagccgaagctagagct
gaagcgaaagccggggccgcaatcgagccgcacctgccagtgccacagccagaagtgcca
cagccagaagtgccattgccagcagagcaacagccagaggccacgcaggctgagaccaag
cagattgaggccaaacagactgaggccaaacagactgcggaaaagtcacaggatggcgct
gggcttcctgcgaatcccgaaaccgccagcggcaccgttaacctcagtgtgcccgctgac
ttgggggacattaccggacatcaggacgacttgcgttggtacaagctgatgtcggccctg
gatatcggcggccgggtgcggcaattggccgttaactctgtgtgccttgactggtctgaa
ccactgcaattggtgctgaagccggaccagaaacatctggctgcgcccattgccatcact
cagctggtggaatcccttggacgggcgctggggcatgtcactgaggtgcaggtggacgtg
gggcaggtagtgggacgggaaacgccgctggagatccgtcagcgtttccaccaggaattg
ctgggacaggcacaggcttctttgctggccgatcccaacgtcaactggctgatgacttgg
gccggggcagaattgcaaccggacagtctcaattatcccggtgagttgctgggggcccgg
ggcagggctttgcctgccttgccgccgctgcaacaaccacaggaggcctga
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