Shewanella sedimentimangrovi: JYB85_07100
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Entry
JYB85_07100 CDS
T07846
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JYB85_07100 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssem02000
]
JYB85_07100 (msbA)
Enzymes [BR:
ssem01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
JYB85_07100 (msbA)
Transporters [BR:
ssem02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
JYB85_07100 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DEAD
AAA_22
ABC_ATPase
AAA_29
nSTAND3
AAA_16
AAA_25
RsgA_GTPase
HUTI_composite_bact
DUF87
Motif
Other DBs
NCBI-ProteinID:
QSX38574
LinkDB
All DBs
Position
1671508..1673310
Genome browser
AA seq
600 aa
AA seq
DB search
MTTSAKNEVWVVFRRLLGYLKPMKSIFVMSVIGLITYGAVDALFIAFIQPFIDNGFSAPK
PQVQGLALDGNKGFGSGSDVLLMAPFVVVGMFTLRGLANFVSTYGISYMSARLIMDMRQQ
VFNHYLTLPVSYMDKENAGNLISRVTFDTEQIARASGSALISIVRDSITVIGMLVLMFYS
SWKLSLCILVVGPLIGWVIATVSRRFRKVSKQIQAAMGGVTATTEQMVKGHKNVLAFGGQ
ETERQRFARVNDQNRHQNMKLAVAQAISQPVIMIIGSFALAFVIYAASLDSLKHELTAGT
FATVLAAMMAMLQPIKNLTRVNAEFQRGIAACTTVFELLDTPSESDKGHYHCERVNGKLT
FDKVKFRYEGQERLALDDISFEVKPGRTLALVGRSGSGKSTIASLVSRFYAGLEQGDILL
DDVSIYDYQLANLRSQVALVSQQVTLFNDSIANNIAYAYPGEVTREQIEQAATLAHAMEF
IKDLPEGLDTQVGENGVLLSGGQRQRIAIARAILRNAPVLILDEATSALDTESEKAIQQG
LDNLRHNRTSVVIAHRLSTIESADEILVVDQGRVVERGSHAELLAKDGMYAKLYQMQFSG
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgacaacatctgccaagaatgaagtatgggtagttttccggcgcctgctgggctatctc
aaaccgatgaaatccatctttgtgatgtcggtgattggcctcattacctacggcgcagtg
gacgccctgtttatcgccttcatccaaccctttatcgataatggtttcagtgctcccaag
ccccaggtgcaggggcttgcattggacggcaacaaaggcttcggatcaggctcagatgtc
ctgttgatggcgccattcgtggtggtgggtatgtttaccctgcgcggcttggccaacttt
gtctccacctatggcatttcctatatgagcgcccgtcttatcatggacatgcgccagcag
gtgtttaatcactacctgacgctgccagtgagctacatggacaaggaaaatgccggcaac
ctgatttcccgggtcacctttgataccgagcagatcgccagggcctccggcagtgcgctg
atctccatagttcgcgacagcattaccgtcataggtatgctggtactgatgttttattcc
tcctggaaattgtcgctttgtatcctggtggtggggccattaatcggttgggtgattgcc
accgtcagccgccgtttccgcaaggtgtccaaacaaattcaggccgccatgggcggtgtg
acggcgacgaccgagcagatggtcaaggggcataaaaacgtgctcgcctttggtggccag
gagaccgagcgacaaaggtttgccagggttaacgatcagaaccgccatcagaacatgaag
ctggcggtggcccaggccatcagccaaccagtcatcatgatcattggctcctttgcgctg
gcgtttgtgatttatgccgccagtcttgacagtctcaagcatgagttgaccgccggtacc
ttcgcgacagttttggctgccatgatggccatgctgcaaccgattaaaaacctgacccgg
gtcaatgccgaattccagcgcggcatcgccgcctgtaccacagttttcgagctgctcgac
actccttcggaaagcgataagggccattatcattgtgagcgggttaacggcaagctgacc
tttgacaaggttaaattccgttatgaaggtcaggaacgcctggcgctggacgacatcagc
tttgaagtgaagcccggccgaactctggcgctggtggggcgctcgggctcgggtaagtcg
actattgccagcctggtgagccgtttttatgccggcctggaacagggcgatatcctgctt
gatgatgtcagtatctacgattatcaactggcgaacctgcgcagtcaggtggccttggta
tcccagcaggtgaccctgttcaacgacagcatcgccaataacatcgcctatgcctatccg
ggtgaggtcacccgcgagcaaattgagcaggcggcgaccctggcgcacgccatggagttc
atcaaagacttgcctgaaggcctggatacccaggtgggcgaaaacggtgtgctgctctcc
ggtggccaacgtcagcgtattgccattgcccgtgccattttgcgtaacgcgccggtgctg
atcctcgacgaggcgacctcggcgctggataccgaatccgagaaggccattcaacagggc
ctggacaacctgcgccacaatcgcacctcggtggtaatagcccacagactgtcgaccata
gaaagcgccgatgaaatattggtggtggatcagggcagggtggtcgagcgcggcagtcat
gccgagctgctggccaaagatggcatgtacgccaagttgtaccaaatgcagttcagtggc
tga
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