Shewanella sedimentimangrovi: JYB85_07140
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Entry
JYB85_07140 CDS
T07846
Name
(GenBank) efflux RND transporter permease subunit
KO
K03296
hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family
Organism
ssem
Shewanella sedimentimangrovi
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
JYB85_07140
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
MMPL
Motif
Other DBs
NCBI-ProteinID:
QSX38582
LinkDB
All DBs
Position
complement(1682275..1685322)
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AA seq
1015 aa
AA seq
DB search
MNITQLAIRRPVTTCMFFLSIVLFGMVSSRLLPLELFPGIDIPQIFINVPYKGSSPAEVE
RDITRVLEESLATMGGIEELRSNSSQDGAEIQVNMKWGENVATKSLEAREKVDAVRHLLP
KDVERVYIQQFSTADMPMLTIRISSERELSGAFDLLDKQLRQPLERLDGVSRVTLYGVEQ
KQISIRIDADRLAASGISASALTERLSRENFTLSAGTLRANNAVYQVSPKGEFKNLQDIE
QLVLARGIRLGDIATVNFQLPERVEGRHLDKRYAVGLDVFKESGANLVEVSERVLKVVDA
VKADKQFSGIRLFIMEDQAFGVKSSLWDLLTAGLLGALLSFAILYLFLRNLGMTLIVVSS
VPISICMTLAGMYFLGYSLNILSMMGLLLAVGMLIDNAVVVTESVLQEKQHELHESKETA
ILSGVNKVALAVLAGTLTTAIVFLPNIFGVKVQLTIFLEHVAIAICISLAASLLVAKTLI
PLMLTRIHIHHEEVEHKNRLQLGYERSLSWILHHPKISTVIAIGLLASTALPLSLVKQDQ
EDGASKERLFINYQIEGRHSLAVTEALVTQMETYLYDNKEAFHIDSVYSYFSPDRASSVL
LMQKDVEFDLDELKKQIREGFPKFSIAKPQFGWGDDKQGIRVTLTGRSTSELIRLSEEAI
PLLSAIKGMEDVRSEVSGAQQEVLIHIDPQMAARLQTPLSELAKGVSMALRGQMLRSFRH
DPSGELRIELAYDKSWQASLDALNQLPVLRHGDRVYTLSSLASIEIVPRFDTIRHYNRQT
SLTIGANLEDLTTEEAQKKIKQAMDHMSFPSGYGYSLRGGFERQDEDQSIMAINMLLAVA
MIYIVMAALFESLLLPSAIITSILFSITGVFWALWLTGTPMSVMAMIGILILMGIVVNNG
IVLVDQINQMTPALEDLSATIHSVCITRLRPVLMTVGTTVLGLVPLAMGDTQIGGGGPPY
SPMAIAIIGGLSFSTVTSLYLVPLCYQALYRLRHRAAMGLWQADKRANRFLPWIS
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgaacatcacccaattggcgatccgtcgcccggtgaccacctgtatgttcttcctgtcg
atagtgctgttcggcatggtgtccagtcgcctgctgccgctggagctttttcccggcatc
gacataccgcagatcttcatcaacgtgccctacaaggggtccagcccggcggaagtcgag
cgggacatcacccgggtgctggaagaatcgctcgccaccatgggcggtatcgaggagttg
agatccaattccagccaggacggcgccgaaatccaggtcaacatgaagtggggtgagaac
gtcgccaccaagagcctggaagccagggaaaaagtggatgccgtgcgtcaccttttgccc
aaggacgtggagcgggtctatatccagcagttttccaccgccgacatgcccatgctgacc
attcgcatttccagtgaacgggaactgtccggagccttcgatctgctcgataagcagttg
cggcaaccgctggagcgtcttgacggtgtctccagggttaccctctatggggtagagcaa
aagcagatcagcattcgcatcgatgccgatcgccttgccgccagtggcatcagtgcctcg
gcgctgaccgagcgcctgagccgggaaaattttaccctttctgccggcactctgagggct
aacaatgccgtctaccaggtgtctcccaagggtgaattcaaaaacctgcaggacatagaa
cagctggttctcgccaggggcatacgcctgggcgatatagccacggtcaacttccagctg
ccggagcgggttgaaggccgtcacctggacaaacgttatgccgtggggttggatgtgttc
aaggagtccggcgccaacctggtggaagtgtccgaaagggtgctgaaggtggtggatgcg
gtcaaggccgacaaacagttcagcggtattcgcctgttcattatggaagatcaggcgttt
ggggtgaaatcgtcactctgggacctgttgactgcgggtttgctgggcgcacttctgtcc
ttcgccattttgtacctgttcctgcgcaatctgggcatgacacttatcgtggtctcttcg
gtgccgatttccatttgcatgacgctcgccggcatgtattttctcggctacagcctgaac
atactgtccatgatgggcctgctgctggctgtgggtatgcttatcgacaacgcggtggtg
gtgaccgaaagcgttctgcaggaaaagcagcacgaactccatgagagcaaggaaaccgca
atcttaagcggcgtcaacaaggttgccctggcggtactggcgggcaccctgaccacggcc
atcgttttcttgcccaatatttttggcgtcaaggtacagctgaccattttccttgaacat
gtggccattgctatctgtatctcactggcggcctcactgttggtggccaaaaccctgatc
cccctgatgctgacccggatccatatccaccacgaggaagtggagcacaagaacaggttg
caactgggctatgagcgcagtctcagttggatcctgcatcatcccaaaataagcactgtt
atcgccatcggcctgctggcctccacagccctgcccctgagcttggtcaagcaggatcag
gaagatggtgccagcaaggaaagactgtttatcaattaccagattgaaggccgccacagc
ctggcagttaccgaagctctggtcacccagatggaaacttacctgtatgacaacaaggaa
gccttccatattgactcggtgtacagctatttcagcccagaccgcgccagctcggtgctg
ctgatgcaaaaggatgtggagtttgatcttgatgaactcaagaaacaaatccgcgaaggc
ttccccaagttttccatcgccaaaccacaatttggttggggcgatgacaaacaagggatc
agggtaacgctcaccggccgctcaacctcggaactgatccgcctgagcgaggaggcaatt
cctttgctcagcgccatcaaggggatggaagacgtgcgctctgaagtcagcggcgcccag
caggaagtattgatccacattgacccgcaaatggcagcccgtctgcagacacctttgtcc
gagttggccaagggcgtgtccatggcgctgcgtgggcagatgctgcgcagtttccgccat
gacccaagcggcgagctgcgtatcgaactggcctatgacaagagctggcaggcatcgctg
gatgcgctcaatcaactgcctgtgctgcgccacggcgaccgggtctataccttgagcagc
cttgccagtattgaaattgtgcccaggtttgacaccatccggcattacaaccgtcaaacc
tctctgaccataggcgccaaccttgaggatctgaccacggaagaggcgcaaaagaaaatc
aagcaggcgatggatcacatgagcttcccctcgggctatggctattctctgcggggtggc
ttcgagcgccaggatgaggatcagtccatcatggcgatcaatatgctgttggccgtggcc
atgatttacatagtgatggcggccctgtttgagtcgctgctgctgccaagcgccatcatc
accagcatactcttctccatcacaggggtgttctgggccctgtggctcacaggcaccccc
atgtcggtgatggccatgattggcatacttatcctcatggggatagtggtcaacaacggc
atagtactggtggatcagataaatcagatgacaccggcgctggaggacttgtcggccacc
attcactccgtctgcatcacccgcctgcggccggtattgatgacggttggcaccacggtt
ctgggtctggttcccctggccatgggggatacccaaattggtggcggcggcccaccctat
tcgcccatggccattgccattatcggcggactgagtttctccacagtaaccagtctgtat
ctggtgccgctgtgttaccaagccctgtatcgtctgcgtcacagagctgccatgggcctg
tggcaagcggataagcgtgccaatcgcttcttgccctggatttcctga
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