Shewanella sedimentimangrovi: JYB85_07190
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Entry
JYB85_07190 CDS
T07846
Symbol
sucC
Name
(GenBank) ADP-forming succinate--CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem00020
Citrate cycle (TCA cycle)
ssem00640
Propanoate metabolism
ssem00660
C5-Branched dibasic acid metabolism
ssem00720
Other carbon fixation pathways
ssem01100
Metabolic pathways
ssem01110
Biosynthesis of secondary metabolites
ssem01120
Microbial metabolism in diverse environments
ssem01200
Carbon metabolism
Module
ssem_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ssem_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JYB85_07190 (sucC)
00640 Propanoate metabolism
JYB85_07190 (sucC)
00660 C5-Branched dibasic acid metabolism
JYB85_07190 (sucC)
09102 Energy metabolism
00720 Other carbon fixation pathways
JYB85_07190 (sucC)
Enzymes [BR:
ssem01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
JYB85_07190 (sucC)
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Ortholog
Paralog
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Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
Ligase_CoA_2
DUF3843
OKR_DC_1_N
Motif
Other DBs
NCBI-ProteinID:
QSX38592
UniProt:
A0ABX7R430
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All DBs
Position
1699159..1700325
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AA seq
388 aa
AA seq
DB search
MNLHEYQAKALFAEYGLPVSEGYACDTPQEAVEAAGRIGGNMWVVKCQVHAGGRGKAGGV
KVTGDKEEIRAFAENWLGKNLVTYQTDEKGQPVAKILVESCTDIANELYLGAVVDRGSRR
VVFMASTEGGVEIEKVAEETPELIHKAIIDPIAGPQPFQARDLGFKLGLNPTQMKQFTKI
FMGLAQMFLDHDFALLEINPLVITTEGNLHCLDGKIGVDGNALFRQPKIKDMHDPSQDDP
REAHAAKFELNYVALDGNVGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVSE
AFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLEGTNAELGAKV
LADSGLDIIAAKSLTDAAQQVVKAAEGK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgcatgagtatcaggcaaaagccctctttgccgaatatggtttaccagtgtca
gaaggctatgcctgcgatacccctcaagaagcggtagaagcagccggccgtattggcgga
aacatgtgggttgtcaagtgccaggtgcacgccggcggccgtggtaaggcaggtggcgtt
aaagtcactggcgataaagaagaaatccgcgcctttgccgagaactggctgggcaagaac
ctggtgacttatcagactgacgaaaaaggccagcctgttgccaagatcctggttgagagc
tgcaccgacatcgccaacgaactctacctgggtgccgttgttgaccgtggcagccgccgc
gtggtgttcatggcttctaccgaaggtggtgttgagatcgaaaaggtggccgaagagacc
cctgagctgatccacaaagccattatcgatcctatcgccggtcctcagcctttccaggcc
cgcgacctgggcttcaagctgggtctgaacccaactcaaatgaagcaattcaccaagatc
ttcatgggcctggcccagatgttcctggaccacgatttcgctctgctggaaatcaaccct
ctggtgatcaccaccgaaggcaacctgcactgtctggacggcaagattggtgtagacggc
aacgcgctgttccgtcagccaaagatcaaagacatgcacgatccttcacaggatgaccca
cgtgaagcccacgctgccaagttcgaactgaactacgtagccctggacggtaacgttggt
tgtatggtgaacggtgccggtctggccatgggtaccatggacatagttaacctgcacggc
ggcaagccagccaacttcctcgacgtgggcggcggcgcgaccaaagagcgcgtttccgaa
gccttcaagatcattctgtctgacagcaatgtgaaggccgtgctggtgaacatcttcggt
ggtatcgtacgttgcgacatgatcgccgaaggtatcattggtgccgttaaagaagtgggc
gtgaaggtgccagtggttgtgcgtttggaaggtaccaacgccgaactgggtgccaaagtg
ctggctgattctggtctggatatcattgctgcgaaaagtctgaccgacgctgcccagcaa
gtagttaaagctgcggagggcaaataa
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