Shewanella sedimentimangrovi: JYB85_07505
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Entry
JYB85_07505 CDS
T07846
Name
(GenBank) mechanosensitive ion channel family protein
KO
K16052
MscS family membrane protein
Organism
ssem
Shewanella sedimentimangrovi
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssem02000
]
JYB85_07505
Transporters [BR:
ssem02000
]
Other transporters
Pores ion channels [TC:
1
]
JYB85_07505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Msl2-3_C
RRM_ESF1
YEATS
Motif
Other DBs
NCBI-ProteinID:
QSX39029
UniProt:
A0ABX7R598
LinkDB
All DBs
Position
1762092..1763762
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AA seq
556 aa
AA seq
DB search
MLLWLLAMGMATTAESPSNATANAAQSDLITAVAKEEQIDREIAGDMGADAHFDYRDPLH
RDTPRGALQGFFHAADAEDFNLAAKYLDLRYLPRGMNIQQAPEYAMMLLAIIDRNLWVDL
ARISDSPEGAVNDGQTAERDSFASLTVAGREVELLLQRVPGSKSSWVWKVSSATVAQLPE
LYRTLGYSPLVEWYIRHVPAGRLLMLDLWEWALILSLLGGAFIVVLPLTWLLRAWLLRSR
WPLRYELARLSSGALRFLLAVLLYKLALGNTTLPAPTRDIADNGLLLALTSVWMLWSLTG
LVQSHWRERLMARGNKQAAALLRPLSNLVRTTVLALATLMWLQHMGFNAGAILAGMGIGG
IAVALASKQSIENFIGAVTLYASAPVKVGQRCKMGELEGRVEEIGLRLTRIRTLDRSVLH
IPNAKLAEMEIENLSEREKIRFNPAIRLDYATGGEQIQAIVTDIKALLARHPMVEKQPLE
VTLGGFGQFGLELKVLAYLATTSVATYHQLAHELHLGIMTIIEHHGSSLVPAAMVMGADE
KGSGREWPNPKVVQAE
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgctgctgtggctgctggccatggggatggcaacgacggccgaatcgccatcgaatgcc
actgccaatgccgcccaatcggacctgataacggccgtggcaaaggaagagcaaatcgac
cgggaaattgccggggacatgggggctgacgcccacttcgattaccgcgatcccttgcat
cgggatacacccaggggcgccttgcagggctttttccatgcggccgacgctgaggatttt
aacctggcggccaaatacctggacttacgttatctgccccgcggcatgaatatccagcag
gcgccggaatacgccatgatgctgctggcgattatcgacaggaatttgtgggtcgatctg
gcccggatcagcgacagtcccgaaggggcggtcaatgatggtcagacggcggaacgtgac
agttttgcgtccctgactgtggcaggccgggaggttgagctgctgctgcaacgtgtgccc
ggcagtaagtcatcatgggtgtggaaggtttccagtgccactgtcgcccaattgcccgaa
ctgtatcgcaccctgggctacagtccgctggtggagtggtatatcaggcatgtgcccgcc
gggcgcctgctgatgctcgacctgtgggagtgggcgctgatcctcagcctgcttggcggc
gcttttatagtggtgcttcccctgacctggctgctgcgggcatggctgctgcgaagccgc
tggccattgcgttatgagctggcccgtctcagcagtggtgcgctgcgttttttgctggct
gtgctgctgtacaagctggcgcttggcaataccaccttgccggcgccaacccgggacatt
gccgataacggattattgctcgccctgacctcggtgtggatgctgtggagcctgaccggc
ctggttcaaagtcactggcgcgagcgtttgatggcccgcggcaataaacaggctgcagcc
ctgttgcggccactgagtaaccttgtccgtaccactgtgctggccctggcgaccctgatg
tggttgcagcacatgggcttcaatgccggagcgatattggccggtatgggtattggcggt
attgcggtggccctggcttccaaacagtccatcgaaaatttcattggtgccgtcaccctg
tatgcctcggcaccggtcaaggtggggcagcgctgcaaaatgggcgagttggaagggcgg
gtggaggaaatcggtctgcgtttgacccgtattcgcaccctcgaccgaagtgtgctgcat
atacccaatgccaagctggcggaaatggaaattgaaaacctgtcggagcgggagaagatc
cgcttcaatccggccatcaggctcgattacgccaccggcggtgaacagatccaggccata
gtcacagacatcaaagccctgttggcgagacaccccatggtggaaaagcaaccgcttgag
gtcaccctgggaggctttggccaatttggtctggagcttaaggtgcttgcttatctcgcc
accaccagtgttgccacctatcatcaactggcccacgagctgcatttgggcatcatgacc
atcatagagcaccatggctcctccctggtgccggcggccatggtgatgggtgcagatgaa
aagggttccggtcgtgaatggcccaatcccaaggtggtacaagcggaatga
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