Shewanella sedimentimangrovi: JYB85_07760
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Entry
JYB85_07760 CDS
T07846
Symbol
hdfR
Name
(GenBank) HTH-type transcriptional regulator HdfR
KO
K23773
LysR family transcriptional regulator, flagellar master operon regulator
Organism
ssem
Shewanella sedimentimangrovi
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssem03000
]
JYB85_07760 (hdfR)
Transcription factors [BR:
ssem03000
]
Prokaryotic type
Helix-turn-helix
LysR family
JYB85_07760 (hdfR)
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Ortholog
Paralog
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
QSX38690
UniProt:
A0ABX7R7G1
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All DBs
Position
1814337..1815209
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AA seq
290 aa
AA seq
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MDTDLLKTFLEVSRTRHFGKAAENLYLTRSAVSFRVKQLETLLGVELFERQRNNIQPTPA
GERMLGHAEAVLTAWERAKQDVSLSLLQSTQLTIGAGPNIWDAYLQGHLQSLHQGLPGVA
LRTEVLPQNVMTRQLMERTLDIAISFDPPKLDDFEQVRVGVVQLQLVSSDGPLTLDECRQ
HRYIKVDWGTAFNILHAQEYGMLPLPVLHTSSSRIALDFVLNNGGSAFLPDHMVRPLLAR
GRLHLVTGAAAIPRNVHVVYWAQNDRLPQIEQAIGFLRREDEEDAEELLA
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggacacggatctgctgaaaacctttttggaagtctcgcgcacccgccatttcggcaag
gcggcggagaatctgtacctgacacgcagtgcggtcagtttcagggtcaaacaactggag
accctgcttggcgttgagctgtttgaacgtcagcgtaacaatattcagccgacaccggcg
ggcgagcgcatgctggggcatgccgaagctgtgttgaccgcttgggagagagccaagcag
gatgtgtccctgagtctgttgcaatcgacccagctcaccataggcgccggtcccaatatc
tgggatgcctatctgcagggacacctgcaaagtctgcatcaggggcttccgggggtagcg
ctgcgcaccgaagtgttgcctcaaaatgtgatgaccaggcaattgatggagcgcacactg
gatatcgccatttccttcgacccgcccaaacttgatgatttcgagcaggtgcgagtgggt
gtggtgcagctgcagctggtgtcaagcgacggtccgctgaccctcgacgagtgccgtcag
cacaggtacatcaaggtggattggggcacggcgttcaatattctccatgcccaggaatac
ggtatgttgccattgccggtactgcacaccagttcatcgcggatcgccttggactttgtg
ctcaataatggcggcagcgcctttttgcctgatcatatggttcgccccttgctcgccagg
gggcgtttacatctggtgaccggtgcagctgccattccccgcaatgtgcatgtcgtctat
tgggcccagaatgacagacttccccaaattgaacaggcgataggttttttgcgtcgggaa
gacgaagaagatgccgaagagctgctggcctag
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