Shewanella sedimentimangrovi: JYB85_07890
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Entry
JYB85_07890 CDS
T07846
Symbol
rlmA
Name
(GenBank) 23S rRNA (guanine(745)-N(1))-methyltransferase
KO
K00563
23S rRNA (guanine745-N1)-methyltransferase [EC:
2.1.1.187
]
Organism
ssem
Shewanella sedimentimangrovi
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssem03009
]
JYB85_07890 (rlmA)
Enzymes [BR:
ssem01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.187 23S rRNA (guanine745-N1)-methyltransferase
JYB85_07890 (rlmA)
Ribosome biogenesis [BR:
ssem03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JYB85_07890 (rlmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_RlmA
Methyltransf_31
Methyltransf_25
Methyltransf_11
Methyltransf_12
Ubie_methyltran
MTS
Methyltransf_23
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
QSX38713
LinkDB
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Position
1841372..1842211
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AA seq
279 aa
AA seq
DB search
MTSQHRSWGRVYQCPLCQLPLAQQANQYSCAKGHSFDCAKEGYVNLLPVAKKRSKDPGDS
KEMIQGRRAFLDAGYYEKLSDRINELALSHAPGAGQALDLGCGEGYYSHRLFRAMNAAAP
MALDGLDISRAAVRYGAKRYPDLAFCVASAYDMPFRDATFDLLLRVYAPSRDEELLRVMR
PGACLITVQPGPMHHFAIKQLIYAEPRLHPEDDSVAEGFELIHAERLQWQLMLGRSDMTE
AFLAMTPYAWKLSQEQKAELCRTGLGCELDFSIRVLRKR
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgacatctcaacatcgcagttggggcagggtatatcaatgccccttatgccagctgcca
ttggcacagcaagctaaccagtacagctgcgccaaggggcacagtttcgattgtgccaaa
gagggttatgtcaacctgctgcctgtggccaagaaacggtccaaggatcccggcgacagc
aaggagatgatccaggggcggcgggcgtttctcgacgcgggttactatgaaaagctcagt
gacaggatcaacgagctggcattgagccatgccccgggggcgggacaggcgctggatttg
ggctgtggcgaaggttattacagtcaccggctgtttcgggcgatgaatgccgcggcgccc
atggcgctcgatggcctggatatttcccgggcggcggtgcgctacggcgccaaacgttat
cctgatttggccttttgcgtcgccagtgcctacgacatgccttttcgcgatgccactttc
gacttgctgctcagagtctatgccccctcaagggatgaggagttattgcgggtgatgcgt
ccgggggcatgtctgattacggtgcaacccggacccatgcaccactttgccatcaagcaa
ctgatttacgccgagccgagactgcatcccgaggatgattcggtcgccgaaggtttcgag
cttatccatgctgagcgactgcagtggcagctgatgttgggccggagcgacatgacggag
gcatttcttgccatgacgccttacgcctggaagctcagtcaggaacaaaaggcggagctg
tgccgcaccggacttggctgtgaactggatttcagtatcagggtgctgcgcaagcgctaa
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