Shewanella sedimentimangrovi: JYB85_08130
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Entry
JYB85_08130 CDS
T07846
Symbol
fadR
Name
(GenBank) fatty acid metabolism transcriptional regulator FadR
KO
K03603
GntR family transcriptional regulator, negative regulator for fad regulon and positive regulator of fabA
Organism
ssem
Shewanella sedimentimangrovi
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssem03000
]
JYB85_08130 (fadR)
Transcription factors [BR:
ssem03000
]
Prokaryotic type
Helix-turn-helix
GntR family
JYB85_08130 (fadR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FadR_C
GntR
HTH_Crp_2
FCD
TrmB
HTH_IclR
HTH_24
Fe_dep_repress
PaaX
LexA_DNA_bind
MarR_2
Rrf2
HVO_A0261_N
MarR
Motif
Other DBs
NCBI-ProteinID:
QSX38758
UniProt:
A0ABX7R6Q5
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All DBs
Position
1887768..1888484
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AA seq
238 aa
AA seq
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MIINAKGPASFAEKYIVRSIWENKFPPGSILPAERELSELIGVTRTTLREVLQRLARDGW
LTIQHGKPTKVNNFWETSGLNILETIADLNPEGFPVLVDQLLSARTNVSAIYFRGALRHN
PDTAIAVLGKIHALSDTPEAYAEYDYELHHTLAFSSGNPLYVLILNGFKGLYSRVGRYYF
TSAEARKLALEFYKSLEQLALRKSYGEVPALMRSYGINSGKMWQQLRDDMPADIAHEA
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcaatgccaaaggccctgcaagttttgcagagaagtacatagtacgttcgatc
tgggaaaataaatttccccccggttccatactgccggctgagcgggaattatctgaactt
atcggtgtcacccgcaccacgctgcgtgaagtgctgcagcgtctggcccgtgatggctgg
ttgaccattcaacacggcaagcccaccaaggtaaacaatttttgggaaacctctggcctg
aatattctggaaaccatagctgatcttaaccctgaaggcttccctgtattggttgatcag
ctgttgtcggccagaaccaatgtcagtgccatctatttccgcggtgcgctgcgccacaat
cccgataccgccatagctgtgctcggcaagatccatgcgttgtcggacacccccgaggcc
tatgccgaatatgactatgagctgcaccacaccttggcgttttcgtcaggaaaccccctg
tatgtgttgatacttaacggtttcaaggggctttatagccgtgttggtcgctactatttc
accagtgccgaagcccgtaagttggcactggaattctacaagtcactggagcagttggcg
ctgagaaagagctatggcgaagtaccggcactgatgcgcagctatggcatcaacagtggc
aaaatgtggcaacagttgcgcgatgacatgccggcggatattgcccacgaggcctga
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