Shewanella sedimentimangrovi: JYB85_08215
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Entry
JYB85_08215 CDS
T07846
Name
(GenBank) 4-hydroxy-tetrahydrodipicolinate synthase
KO
K01714
4-hydroxy-tetrahydrodipicolinate synthase [EC:
4.3.3.7
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem00261
Monobactam biosynthesis
ssem00300
Lysine biosynthesis
ssem01100
Metabolic pathways
ssem01110
Biosynthesis of secondary metabolites
ssem01120
Microbial metabolism in diverse environments
ssem01230
Biosynthesis of amino acids
Module
ssem_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JYB85_08215
09110 Biosynthesis of other secondary metabolites
00261 Monobactam biosynthesis
JYB85_08215
Enzymes [BR:
ssem01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.7 4-hydroxy-tetrahydrodipicolinate synthase
JYB85_08215
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Gene cluster
GFIT
Motif
Pfam:
DHDPS
Motif
Other DBs
NCBI-ProteinID:
QSX38774
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All DBs
Position
1905339..1906220
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AA seq
293 aa
AA seq
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MINGSIVALITPMNSDGSVDFAGLERLVEFHIDNGTDAIVAVGTTGESATLPMKEHVNVV
AQTVTFAAGRIPVIAGNGANATAEAIELTQALAKTGVAAMLGVTPYYNKPTPKGLIAHYT
AVAAATDIPQILYNVPGRTAVDMKPETIAELSQIDNIIGIKEATGDLSRVGMLRHLCSKK
FKLYSGDDATAREFLLLGGDGVISVANNIVPAQFKAMCTQALAGDREGSFATDLPLRGLY
STLFMEANPIPVKWATHRMGLISNGHIRLPLTELSESCHGLLLEAMQTAGLEV
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgataaacggaagcatcgtagccttaatcacgcccatgaacagtgatggctcagtggat
tttgccggccttgagcgcctggtggaatttcatatcgacaatggtacagacgccatagtg
gccgtgggtaccactggcgagtcggcaaccttgccgatgaaagaacatgtcaatgtggtt
gcccagacagtgacctttgctgccggccgcatccccgtcatcgccggcaacggtgccaat
gccacggccgaagcgattgagttgacccaggcgcttgccaagacaggtgtggctgcgatg
ttgggtgtgaccccctactataataaaccgacgcccaagggcctgattgcccattacacc
gcagtggcggcggcaaccgacattccgcaaattctgtacaatgttcccggccgtaccgcg
gttgatatgaagcccgagaccattgccgagctgagtcagattgacaacatcatcggcatc
aaggaagccacgggcgatttgtcccgtgtgggtatgttgcgtcatctgtgtagcaaaaag
ttcaaactttacagcggtgatgatgcgaccgcccgtgaatttctgctgctgggcggtgac
ggggtcatttccgtggccaacaacatagttccggcccagtttaaagccatgtgtacccag
gcgctggctggcgatcgcgagggctcttttgccaccgatttgcccctgcgtggtctctac
agcaccttgttcatggaagccaatccgatcccggtaaaatgggccacccaccgtatggga
ttgatcagtaatggtcacattcgtctgcctttgactgaactttctgagtcttgtcatggt
ctgttgcttgaagcaatgcaaactgccggcttagaggtttaa
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