Shewanella sedimentimangrovi: JYB85_08485
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Entry
JYB85_08485 CDS
T07846
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem00730
Thiamine metabolism
ssem01100
Metabolic pathways
ssem01240
Biosynthesis of cofactors
Module
ssem_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
JYB85_08485 (thiC)
Enzymes [BR:
ssem01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
JYB85_08485 (thiC)
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Ortholog
Paralog
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
QSX38823
UniProt:
A0ABX7R4W2
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All DBs
Position
1969629..1971629
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AA seq
666 aa
AA seq
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MSNRRETRAAAQAFIENLKPLAHPNSEKIYLQGSRADIRVGMRQIHQTDTRIAAADGSIR
LEPNPAIRVYDCAGAYSDPAAKINVRQGLAALRSPWILERDDTEVLEGVSSQFTQQRLAD
EGLDHLRFDALPKPRRAKAGKRVTQMHYARAGIITPEMEYIAIRENLARAADTSGDGWDE
QLTRRKPGEAFGALVGQPITAEFVRDEVARGRAIIPANINHPEAEPMIIGRNFLVKVNAN
IGNSAVTSSIEEEVEKLVWATRWGADTVMDLSTGRYIHETREWIVRNSPVPIGTVPIYQA
LEKVNGIAEDLSWEVFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRVTGIVSRGGSIM
AKWCLSHHKENFLYTHFRDICELCAAYDVSLSLGDGMRPGSIADANDEAQFAELETLGEL
VKIAWEYDVQTIIEGPGHIPMQLIKENMDKQLEHCAEAPFYTLGPQTTDIAPGYDHFTSG
IGAAMIAWYGCAMLCYVTPKEHLGLPNKEDVKQGLIAYKIAAHAADVAKGHPSAQLRDNA
LSKARFEFRWEDQYNLGLDPDTARAYHDESLPQESAKVAHFCSMCGPKFCSMKITQDVRD
YAAGLEAAKAAGANDTAQAIEVQAIAVQHSIARDGMAKMSDAFRDAGGALYSEHHVDGVL
EPVSGE
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaccgtcgtgaaacccgtgccgccgcccaggcttttattgaaaacctcaagccg
ctggcccatcccaattcagaaaaaatctacctgcagggctcccgtgccgatatccgggtc
ggtatgcggcagatccaccagactgatacccgcattgccgccgcagatggcagtattcgt
ttggagcccaacccggcaatccgggtttatgactgtgccggcgcctacagcgatccggcc
gccaagatcaatgtccgccagggattggctgcactgcgcagcccctggatcctggaacgg
gatgataccgaggtccttgaaggtgtcagctcccaattcacccagcaacgccttgccgat
gaagggctggatcatctgcgctttgatgcgctgcccaaaccccgccgcgccaaggccggc
aagagggtgacccagatgcattatgccagggcggggatcatcaccccggaaatggaatac
atagccattcgggaaaacctggcccgggccgctgacacaagcggcgatgggtgggatgaa
cagctcacgcgacgcaaacccggtgaagccttcggtgccctggtggggcagcccattacg
gccgagtttgtccgagacgaggtggcccgcggccgcgccatcatccccgccaatattaat
caccccgaggcagagccgatgatcatcggccgtaatttcctggtgaaggtcaatgccaac
ataggcaactctgcggtgacctcatccatcgaggaagaggtggaaaaactggtatgggcc
acccgctggggcgcagatactgtgatggacttgtccaccggtcgctacatccacgagacc
cgcgaatggatagtgcgcaactcgcccgtgcccataggcacagtgcccatctaccaggcg
ctggagaaggtaaacggcatagccgaggatctcagctgggaagtgttccgcgacaccctg
attgagcaggcggagcagggggtggattactttaccattcacgccggtgtgctgctgcgt
tacgtgcccatgaccgccaagcgggtgacaggcatagtgtcccgcggtggctccatcatg
gccaagtggtgcctgagtcaccacaaggagaacttcctctacacccatttccgcgacatc
tgtgagctatgcgccgcctacgacgtctccctgtccctgggggacggcatgcgtcccggt
tcaatcgccgatgccaacgacgaggcccagtttgccgagctggaaaccctgggggaactg
gtgaaaatcgcctgggaatatgatgtgcagaccatcatcgaaggtcccggccatattccc
atgcagctcatcaaggagaacatggacaagcagctggagcactgcgccgaagcgccgttt
tataccctgggtccccagaccacagacatagcgccgggctacgatcatttcacctccggc
ataggggcggcgatgatagcctggtacggttgcgccatgctttgctacgtgacgccgaag
gaacatctcggcttgccgaacaaagaagacgtcaagcagggcctaatcgcctataagatt
gccgcccacgccgctgacgtggccaagggccatccaagcgcccagttgcgggacaatgcc
ctgtcgaaggcccgttttgagttccgctgggaagatcagtacaacctggggcttgatccc
gacacggcccgggcctatcacgatgagtcactgccccaggagtcggccaaggtggcccat
ttctgctccatgtgcggtcccaagttctgttcgatgaagatcacccaggacgtgcgtgac
tacgccgccggcttggaagcggccaaggctgcaggagcaaatgacacagcccaggccatc
gaagtgcaagccatagctgtgcagcacagtattgcccgggacggcatggcgaaaatgtcc
gatgccttccgcgatgccggcggagccctgtacagcgagcatcatgtggatggggtgctt
gagcccgtttcaggggaatag
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