Shewanella sedimentimangrovi: JYB85_08565
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Entry
JYB85_08565 CDS
T07846
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
JYB85_08565 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ssem01007
]
JYB85_08565 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssem03016
]
JYB85_08565 (aspS)
03029 Mitochondrial biogenesis [BR:
ssem03029
]
JYB85_08565 (aspS)
Enzymes [BR:
ssem01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
JYB85_08565 (aspS)
Amino acid related enzymes [BR:
ssem01007
]
Aminoacyl-tRNA synthetase
Class II (A)
JYB85_08565 (aspS)
Transfer RNA biogenesis [BR:
ssem03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
JYB85_08565 (aspS)
Prokaryotic type
Other AARSs
JYB85_08565 (aspS)
Mitochondrial biogenesis [BR:
ssem03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
JYB85_08565 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QSX38837
UniProt:
A0ABX7R4S3
LinkDB
All DBs
Position
1988711..1990480
Genome browser
AA seq
589 aa
AA seq
DB search
MRSHYCGDVNKSHVGQEVTLVGWVNRSRDLGGVVFLDLRDREGLIQVVYDPDLPEVFDVA
STLRAEFCVQVKGIVRARPDSQVNSQMKTGEIEVLGKQLTIINAADPLPLSLDNHQHNSE
EQRLKYRYLDLRRPEMAQRLIFRAKVTSAVRRFMDSNGFLDIETPILTKATPEGARDYLV
PSRTYKGQFFALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSF
MTSDQVMAKTEEMVRGLFLELLNVDLGVFPRMTWDEAMRRFGSDKPDLRNPLELVDVADL
LKAVDFAVFSTPANDEEGRVAALRIPGGAALSRKQIDDYTKFVGIYGAKGLAWMKINELS
AGLDGIQSPVAKFLNEAIINEIISRTGATDGDIIFFGADKANVVAESIGALRLKAGEDFN
LLEGEWRPLWVVDFPMFEKADGRFHAVHHPFTAPSGVSAAELEANPGKAVSDAYDMVLNG
CELGGGSVRIHNQEMQSTVFRILGIEDEEAKEKFGFLLEALRFGTPPHAGLAFGLDRLVM
LMTGASSIRDVMAFPKTTTAACPLTNAPGFANPQQLAELGVSVAEKPKA
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagtcattattgtggagacgtcaacaagtctcacgtcgggcaagaagtcactctg
gtcggttgggtcaaccgcagccgggatttgggtggcgtagtatttctggatctgcgtgac
cgcgaaggtctgatccaggtggtctatgatccggacctgcccgaagtgttcgacgttgcc
agcacactgcgcgccgagttctgtgttcaggtcaaaggcatagtccgtgcccgtcccgac
agccaggtcaacagccagatgaagaccggtgaaatcgaggtattgggcaagcagctgacc
ataatcaacgccgccgatccgctgccactgagcctggacaatcaccagcacaacagcgaa
gagcagcgcctcaagtaccgttacctcgacctgcgccgtcccgagatggcccagcgcctg
attttccgcgccaaggtcaccagtgccgtacgacgcttcatggacagcaacggtttcctc
gacattgaaaccccaatcctgaccaaggccacccctgaaggcgcccgtgactatctggtg
cccagtcgtacctacaagggccagttcttcgcgttgccccagtctccccagctgttcaaa
cagctgctgatgatgtcaggctttgatcgctattatcaaatcgtcaaatgcttccgcgac
gaagatttgcgcgccgaccgtcagcccgaatttacccagatagatatcgaaacctccttc
atgacctcggatcaggtgatggccaagacagaggaaatggtccgtggtctgttcctggaa
ctgctgaacgtggatctgggcgtgttccccaggatgacctgggacgaagccatgcgccgc
ttcggctccgacaagccggatctgcgtaacccgctggaactggtggatgtggccgacctg
ctgaaagccgtggatttcgccgtgttcagcacccccgccaacgacgaggaaggccgggtg
gccgccctgcgtatccccggtggtgccgccctgtctcgcaaacagatagacgactacacc
aagttcgtcggcatctacggtgccaagggcctggcctggatgaagataaacgaactgagt
gccggtcttgacggcattcagtcaccggtggccaagttcctcaatgaagccatcatcaat
gaaatcatcagccgcaccggcgccaccgacggcgacatcatcttcttcggtgccgacaag
gccaacgtagtggccgagtccatcggcgcactgcgtctcaaggccggtgaagacttcaat
ctgcttgagggcgagtggcgtccgctgtgggtggtggatttccccatgttcgaaaaggcc
gatggtcgtttccatgcggtacaccatcccttcaccgcgccaagtggcgtgagtgcggcc
gagctggaagccaatccgggcaaggccgtgtccgatgcctacgacatggtgctcaacggt
tgcgaactgggtggcggttccgtgcgtatccacaaccaggaaatgcagtccactgtattc
cgcatcctgggcatcgaagatgaggaagccaaagagaagttcggcttcctgctggaagcg
ttgcgcttcggcaccccaccacacgccggtctggcctttggccttgaccgtctggtgatg
ctaatgacaggcgccagctccatccgtgacgtgatggccttccccaaaaccaccacggcg
gcctgtccgctgaccaatgcgcccgggtttgccaacccgcagcagctggcggaactgggt
gtctcggtggctgaaaagcccaaggcataa
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