Shewanella sedimentimangrovi: JYB85_08580
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Entry
JYB85_08580 CDS
T07846
Symbol
ruvA
Name
(GenBank) Holliday junction branch migration protein RuvA
KO
K03550
holliday junction DNA helicase RuvA
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
JYB85_08580 (ruvA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssem03400
]
JYB85_08580 (ruvA)
DNA repair and recombination proteins [BR:
ssem03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JYB85_08580 (ruvA)
RecFOR pathway proteins
JYB85_08580 (ruvA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvA_N
RuvA_C
HHH_5
HHH
RecR_HhH
IMS_HHH
Transposase_20
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
QSX38840
UniProt:
A0ABX7R7V4
LinkDB
All DBs
Position
1991834..1992451
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AA seq
205 aa
AA seq
DB search
MIGRLKGILVEKQAPEVLLDVHGVGYELQMPLTSFYELPAIGEEALIYTHFVVREDAQLL
YGFITKQERSLFRLLIKANGVGPKLALTILSGMTAQEFVGCVERDDIATLVKLPGVGKKT
AERLLVEMRDKLKSLMEASMGSEREFVLQSNFTPAVEESSAEEDAIAALLALGYKPPQAS
KAVSAAYREGMDSETLIKAALKSML
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgattggaagattgaaaggcatattggttgagaagcaggcccccgaggtattgctggac
gtccacggtgtgggttacgagctgcaaatgccactgaccagtttttacgaactgccggct
atcggcgaagaggcgctgatctacacccattttgtggtgcgtgaagatgcccagctgttg
tatggttttatcaccaagcaggaacgctccctgttccgcctgctgatcaaggccaacggc
gtcggtcccaagctggcactgaccatattatccggcatgacggcccaggagtttgtcggt
tgtgtcgagcgcgacgatattgccaccctggtgaaactgcccggcgtcggcaaaaagacc
gccgagcgcttgctggttgaaatgcgtgacaagctcaagagcctgatggaagcctccatg
ggctcggagcgggaatttgtgctgcagtccaacttcaccccggcggtggaagaaagcagc
gccgaagaagatgccattgccgccttgttggctttgggctacaaaccaccccaggcaagc
aaggccgtatcggcggcttaccgtgagggtatggactcagagacgctgattaaagccgcg
ctcaaatctatgctgtga
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