Shewanella sedimentimangrovi: JYB85_08590
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Entry
JYB85_08590 CDS
T07846
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
ssem
Shewanella sedimentimangrovi
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssem02000
]
JYB85_08590
Transporters [BR:
ssem02000
]
Other transporters
Pores ion channels [TC:
1
]
JYB85_08590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
Motif
Other DBs
NCBI-ProteinID:
QSX38842
LinkDB
All DBs
Position
1994152..1996722
Genome browser
AA seq
856 aa
AA seq
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MFTKNRIAQSVKLAVMASLSVGATAAMAEEAAGAKVERIAVTGSRIQRQDMETASPVTVI
SAESIRAEGYTSVDQMLQTQTSMAGAAVGSTTNNGSDGVAQVDLRGMGAQRTLVLLNGRR
MVNSGSGADSAVDLNSIPVAMIARVEILKDGASAVYGSDAIAGVVNIITKKDFDGFQFDL
NGSGTDKGDGETGELSALYGFNTENGGNYTFGAAYSERRGVIQADRSWTEAGGSSYVPQG
GLLGNKFDADGDVILDDEGKPKKQVKVVDNGVWGPLQQGYDYTQDSWYQTPSKRYSLFAN
MVQELSDDLVLNGDVLYTKRKSDQQMAPQPASVMLDVCGEPKADAIRCVTLDQAMLDGGI
VADDTGRVEYRRRTNDVGPRVYNQDTDTLRASVALQGSLDAGTGMTWDLSYTYGKNKADT
WVENSINALHTANAVYANQDAFFSGAPLTQDIINEISYLEETTGGNEQNIVSGVLSGELF
DLDAGAVGFAIGAEYRRDSGYYNPDPVIVRGEGTAAQQDPTKGAYDVISIYEEVSVPFSD
KLTGEFALRFDDYSTFGKATTWKVGLTYVANDQLMLRTVAATGFRAPNVSELYGGNTQSF
DYLVDPWGKELDQQIKVNYTSDANIQPEESESYTAGLVYSPEFIDGMSMTLDYWRFKVSN
AITRLDAQQGLNDCHAGDAAACELFMITAEGNLETFTNPLTNVGTQDTSGIDFNLSYNFE
ALGLDWHINNDLTYLLNFEQDGNDYTNTIDGNFGGYARVRNNLSLKAGAEDWDLMYYNRF
IGEIDYLEDGSAVDSVLYHNIVASYHLNDGLSMSVGVKNFTDVKPSYVENGSDGGTVPEV
YDTIGRQIYGSVTYKF
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgtttacaaaaaacagaatcgcccaatctgtaaagcttgcggttatggcttctttgtct
gtgggtgccacagctgccatggccgaagaagcggccggcgctaaagttgaacgtatcgct
gtaaccggttcacgtatccaacgtcaggatatggagaccgcctctccagttacagtgatc
agcgccgagtccatccgcgccgaaggttacacttctgtcgatcaaatgctgcaaacccag
acttccatggccggtgctgccgtgggttctaccaccaacaacggctctgacggtgtggcc
caggtggatctgcgcggtatgggtgcccagcgcactctggtactgctgaatggtcgccgt
atggtgaactcaggctcaggtgccgacagcgccgtggatctgaactccatcccggtagcc
atgatcgcccgcgttgaaatcctcaaagacggcgcctcagccgtatacggctctgacgcc
atcgccggtgtggtcaacatcatcaccaagaaagacttcgacggcttccagttcgatctg
aacggcagcggcaccgacaagggtgacggcgaaacaggtgaactgagcgccctgtacggt
ttcaacaccgaaaacggtggcaactacaccttcggtgctgcctactccgagcgccgtggt
gttatccaggccgaccgcagctggaccgaagccggtggcagttcttacgttccccagggt
ggtcttctgggtaacaagtttgacgcagatggcgatgtaatactggatgatgaaggcaag
cccaaaaagcaagtaaaagtcgtggacaatggtgtttggggtccattgcagcagggttat
gactatacccaggacagttggtatcagactccaagcaagcgttacagcctgtttgccaac
atggtgcaggaactgtccgatgacttggtgctgaacggcgacgtgctgtacaccaagcgt
aagtcagatcaacaaatggcccctcaaccggcttccgtaatgctggatgtttgtggtgag
ccaaaagctgacgctatccgttgtgtgaccctggatcaggccatgcttgatggcggtatc
gtagcggacgacacaggccgtgttgaataccgtcgtcgtaccaatgatgtgggtccacgt
gtctacaaccaggatactgatacgctgcgtgcctcagttgctctgcagggcagcctggat
gccggcaccggcatgacctgggatctgtcctacacctatggcaagaacaaggccgacacc
tgggttgaaaactccatcaatgccctgcataccgccaatgccgtgtatgccaaccaggat
gccttcttcagtggcgcaccgctgacccaggacattattaacgaaatcagctacctggaa
gaaaccaccggtggcaacgagcaaaacattgtctccggtgtactgagcggtgaactgttc
gatctcgatgccggagccgtgggctttgccatcggtgccgaataccgtcgcgacagcggc
tattacaacccggatcctgtgatcgtgcgtggtgagggtaccgctgcccagcaggaccca
accaagggtgcttacgacgttatctccatctacgaagaagtcagtgtgcctttcagcgac
aagctgaccggcgaatttgccctgcgcttcgatgattactccaccttcggcaaggcgacc
acctggaaagtgggtctgacctacgttgccaacgaccagctgatgctgcgtaccgtggcg
gccacaggtttccgcgcccccaacgtgtcagagctttacggtggtaacacccagtccttc
gattacctggtcgatccctggggtaaagaactggatcaacagatcaaggtgaactacacc
tccgatgccaacatccagcctgaagagtctgagtcttacaccgcaggtctggtgtactct
cctgagttcatcgatggcatgtccatgaccctggactactggcgcttcaaggtgagcaac
gccattacccgtctggatgcccagcaaggtctgaacgactgccacgccggcgacgctgcc
gcctgtgaactgttcatgatcactgccgaaggcaacctggagactttcaccaacccgctg
accaacgtgggtactcaggacaccagcggtatcgacttcaacctgagctacaactttgaa
gccctgggtctggattggcacatcaacaacgatctgacctatctgctgaactttgagcag
gatggcaacgactacaccaacactatcgacggcaacttcggtggttacgcccgcgttcgt
aacaacctgagtctgaaggccggtgccgaagattgggatctgatgtactacaaccgtttc
atcggtgaaatagactacctggaagacggttctgccgtggattcagtgctgtaccacaac
atagtggccagctatcacctgaacgatggtctgagcatgtctgtgggcgtgaagaacttc
accgacgttaagccttcctacgttgagaacggcagcgacggcggcacagtaccagaggtt
tacgacactatcggtcgtcaaatctacggtagcgtgacctacaagttctaa
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