Shewanella sedimentimangrovi: JYB85_08850
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Entry
JYB85_08850 CDS
T07846
Name
(GenBank) FNR family transcription factor
KO
K01420
CRP/FNR family transcriptional regulator, anaerobic regulatory protein
Organism
ssem
Shewanella sedimentimangrovi
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssem03000
]
JYB85_08850
Transcription factors [BR:
ssem03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
JYB85_08850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_Crp_2
Crp
cNMP_binding
MarR_2
DUF6917
RXLR_WY
MarR
Motif
Other DBs
NCBI-ProteinID:
QSX38883
LinkDB
All DBs
Position
complement(2047435..2048181)
Genome browser
AA seq
248 aa
AA seq
DB search
MDQTKGRRPANAGCTIHCHDCSMGTLCIPFTLNTNELDQLDNIIERKKPIQKGEQIFQSG
DSLKSLYAIRSGTVKSYTITEQGDEQITGFHLAGDVIGFDGIHGQSHQSFAQALETSMVC
EIPFNTLDELSGTMPKLRQQIMRLMSNEIMSDQEMILLLSKKNAEERLAAFISNLARRYG
NRGFSAREFRLTMTRGDIGNYLGLTVETISRLLGRFQKSGLIEVKGKYITILDAAGLNQL
AGTARIAR
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaacaaaaggccgtcgccccgcaaacgcaggttgcaccatacattgtcacgac
tgcagcatgggaactctgtgtattccatttacgttgaataccaatgagttggatcagttg
gacaacatcattgaacgcaaaaagcccattcaaaagggcgagcaaatttttcagtccggt
gattccctgaaatctttgtatgccattcgttcaggaaccgtaaaaagttacaccatcaca
gagcaaggtgatgagcaaatcaccggctttcacctcgccggcgacgtcataggttttgat
gggatccacggtcaaagccaccaaagctttgcacaggcactggaaacctccatggtatgc
gagatccccttcaataccctggatgaactgtccggcaccatgcccaagttgcgtcagcaa
atcatgcgtctgatgagcaatgaaatcatgagcgatcaagagatgatcctgctgctgagc
aagaagaatgccgaggaacgactggcggcatttatcagtaacctggcccgtcgctacggt
aaccgtggtttctccgcccgggaattcaggctcaccatgacccgcggcgatataggcaac
tatttgggactgacggtcgaaaccatcagccgtttgctggggcgcttccagaagtcaggt
ttgattgaggtgaaaggcaagtacatcaccatattagacgctgccggcctcaatcaactg
gccggcactgccagaattgcaaggtga
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