Shewanella sedimentimangrovi: JYB85_09770
Help
Entry
JYB85_09770 CDS
T07846
Name
(GenBank) LysR family transcriptional regulator
KO
K21699
LysR family transcriptional regulator, transcriptional activator for bauABCD operon
Organism
ssem
Shewanella sedimentimangrovi
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ssem03000
]
JYB85_09770
Transcription factors [BR:
ssem03000
]
Prokaryotic type
Helix-turn-helix
LysR family
JYB85_09770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
Motif
Other DBs
NCBI-ProteinID:
QSX35680
LinkDB
All DBs
Position
2254825..2255724
Genome browser
AA seq
299 aa
AA seq
DB search
MQVHDVDLRLLRIFVAIVECGGLSAAESRLNIGRSTISSHLSDLEVRLGLKLCKRGRSGF
ELTESGRVTYQASLELLQQCEAFASTVASSKQQLSGRVTIAIIDTLVSDPRCGVARAIAS
LKARSNNIQFDINVCEAREVETSVVNGRSLAGIGVSRHHLRGLDYEPLHNETNYLYCGVG
HPLFDCDPGASQKLLQNAEVITSNYTRDKESRNDDLNYQNSATAYHDEGIAHLILSGKFI
GYLPEHYASYWVDKGLFRAILPEKYSYQIPVVLITSKNNSATPLAKALIKEIKRCHGVE
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggtacatgatgtagatctgaggctgctgcggattttcgtggccatagtggaatgt
ggcggcctgtcggcggcggaatcccggctcaatattggtcgctccaccatcagctcccac
ctgtcggatctggaggtgcgcctggggctgaaactgtgtaaacgcggtcgcagcggcttt
gaactgaccgaatccggacgggtgacctatcaggcgtcgctggaactgctacagcaatgt
gaggcctttgccagcacggtcgccagctccaagcagcagctgtcgggccgggtaaccata
gccatcatcgataccctggtaagcgatccccgctgcggtgtggcccgggccatagcctcg
ctcaaggccaggagcaacaacatccagttcgatatcaacgtctgtgaggcccgcgaagtg
gaaacttctgtggtgaacggccgctcccttgcgggtataggcgtcagtcgccatcatttg
cgcggcctcgattacgagccgctgcacaacgaaaccaactatttatattgcggcgtcggc
catcccttgtttgactgcgaccccggggcaagccagaagctgctgcaaaatgccgaagtc
atcaccagtaactacacccgcgataaggaaagtcgcaacgacgatttgaattatcaaaac
agcgccaccgcctaccacgacgaaggcatagcccatttgatcctgtcggggaaatttatc
ggctacctgccggagcactacgccagctactgggtcgacaagggcctgttcagggcgata
ttgccggaaaaatactcctaccaaatccccgtggtgctgatcacctccaaaaacaattcg
gccacgcccttggccaaggcgcttatcaaggaaatcaaacgctgccacggggtggagtga
DBGET
integrated database retrieval system
