Shewanella sedimentimangrovi: JYB85_10300
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Entry
JYB85_10300 CDS
T07846
Name
(GenBank) PAS-domain containing protein
Organism
ssem
Shewanella sedimentimangrovi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_7
HATPase_c
HisKA
Response_reg
HATPase_c_3
HATPase_c_2
PAS_8
PAS_4
PAS
Motif
Other DBs
NCBI-ProteinID:
QSX35772
LinkDB
All DBs
Position
complement(2374869..2378297)
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AA seq
1142 aa
AA seq
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MNLTLFVAVIAVFYVFLLFLLAWGAERWFSGVTKKLQVWIYGLSLAVYCSSWSFLGTVGQ
AASDMWSFLPIFIGPILVFTLGFGLLRKMVLVSKAQNITSVADFIAARYGKSQLLAALVT
LIALFGIMPYIALQLKAMIASLDLFQRPDDPLDAGNVGLMISAVLAVFAILFGTRKLDAT
EHNPGMMLAIAFESLVKLAAFLLVGAVISFGVFDGFGDIWQQAVARDLVANPTVRLEAIL
PDLLVGIAAFLCMPRQFHVMVVECAGEQTLSRGRWLFPVYIALFGLFVAPLALAGKVLLG
DSVPADSYVINLPLALEQPALAVVALLGTLSAATGMVIVAVVTISVMVSNEWLVPLMLKT
GRIREKNFSQFSTFLLNARRLTIVLILAMGYLSYLNLSNSDSLSHLGMLSFGAFAQLAPA
LVGGLYWKYGNRSGVFLGLVAGFGLWGYVLIKGAMGEAGGAGEGLRLLAYISPNVSDTLL
ALLVNSVAYVLGSLWFRAGVVERIQASAFVLPGELKGSGNRKTVPISQQDLLILASRFVS
PTRAYESFSRFSPETVNRDNWNKAAPPELIAHTEHMLAGVLGASSAALVMDSVLQGRDLA
LDEVFSLVDEASSKVMLSQEILRGAIEHAYEGISVVDKDLNLVAWNFRYAELYQYPSNFL
QAGMPISEVIRFNAARGYCGEGDIEEQVARRVQHMRDGTPHTSERQRSDGKVIKIQGNPM
PDGGFVMTFTDITQYRQQEKALLEINETLESRVRERTYELALLNSQLLEAKAQEEMANAS
KSRFLAAVGHDLMQPLNAARLFTASLSQYPKLDQEARTTLSHVNSSLRIAGELLTDLLDI
SKLDSGMVEVNRRDFAVADLLNGLAVEFDAMATDHGIRFAMVPSTATINSDPALLRRVLQ
NFLTNAYRYAKGGRVLLGCRHRDKALEIQVLDTGCGIDEKELYEIFKEFKRLNNPNSQGV
SGLGLGLAIADRISKVLNHEIRVTSVLGKGSLFSILVPLGETVSQVQPRATPAVLKPLAG
VKVLCIDNEEAILAGLESLLSRWHCEVICARDLGDARIKLGLKGVAPDIVLADYHLDDGQ
NGVDAMDGIRALYGQQLPGILITANTRKELVEDVQRRGYHYMAKMIKPASLRALISSLVK
AA
NT seq
3429 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgaccctgtttgttgccgttattgcggttttttacgtctttctgctgttcctg
ctggcctggggggctgagcgctggttcagcggtgtcaccaaaaagctgcaggtgtggatc
tatggcctgagcctggcggtctattgttcctcctggagcttcctcggcaccgtgggtcag
gcggcctccgatatgtggtccttcctgccgatttttatcggccccattctggtgttcacc
ctcggctttggcctgctgcgcaagatggtgctggtgtccaaggctcagaacatcacctcg
gtggccgactttatcgccgcccgttacggcaaatctcagctgctggcggccctggtgacc
ctgatagccctgttcggcatcatgccctatatagccttgcagcttaaagcgatgatcgcc
agtctggatttgttccaacgcccggatgatcccctggacgccggcaatgtgggactgatg
atctccgctgtgctggcggtgtttgccattctgttcggtacccgcaagctcgatgccacc
gaacacaatccgggcatgatgctggccattgcctttgaatccctggtgaagctggcggcc
tttttgctggtgggtgccgtgataagttttggggtttttgatggtttcggcgatatctgg
cagcaagccgtggcccgggatctggtggccaatcccaccgtcaggctggaggccatattg
ccggatctgttggtgggcatagccgcgtttctctgtatgccaaggcagtttcatgtgatg
gtggtcgagtgcgccggtgagcagaccttgagccgtggccgctggctgtttcccgtttat
atcgccttgtttggcctgtttgtggcgcccttggcgctggcgggcaaggtgctgctcggt
gacagcgtgcccgccgattcctatgtgattaacctgccgctggcgctggagcaaccggcc
ctggccgtagtggcgctgctcggcaccctgtccgccgccaccggcatggtgatagtggca
gtggtgaccatatctgtgatggtcagtaacgagtggctggtgccactgatgctcaaaacc
ggccgcatccgtgagaagaatttcagccagttttccacctttttgctcaatgcgcgccgc
ctgaccatagtgcttattctggccatgggctatttgtcctacctgaatttgtccaacagc
gactcactttcgcacctgggcatgttgtccttcggggcctttgcccaattggcgccggcg
ctggtgggtggcctgtattggaaatacggcaaccgcagcggcgtgttcctgggcctggtg
gcgggctttggcctctggggctatgtgcttatcaagggcgccatgggtgaggctggcggc
gccggggaaggcctgcggctgctggcctatatcagccccaatgtcagtgataccctgctg
gcactgctggtgaacagtgtggcctatgtactcggttcactttggtttcgcgccggggtg
gtggaacgtattcaggccagcgcctttgtgttgccaggtgagctgaagggcagtggcaat
cgcaagacagtacccatcagtcagcaggatttgctcattcttgccagccgttttgtcagc
cccacccgggcctatgaaagcttttcccgtttctctcccgaaaccgtcaatcgcgacaac
tggaacaaggcggcgccccctgagttgattgcccacacagagcacatgctggccggtgtg
ctgggggcctccagtgcggcactggtgatggattcggtattgcagggacgggatctggcc
cttgatgaggtattcagcctggtggatgaggcctcaagcaaggtcatgctgagccaggag
atcctccgcggcgccattgaacatgcctacgaagggatcagtgtggtcgacaaggatctg
aacctggtggcctggaatttccgctatgccgagctgtatcagtatccgagcaattttttg
caggcgggtatgcccatcagtgaagtgatccgcttcaacgccgcccgcggctattgcggt
gagggcgacattgaggagcaggtggcgcgccgggtgcaacatatgcgtgatggcacgccc
catacctcggagcggcaacgcagcgacggcaaggtgatcaaaattcagggtaaccccatg
ccggacggcggtttcgtgatgacctttaccgatattacccagtaccggcaacaggaaaag
gcgctgctggaaattaacgaaacccttgaaagtcgggtgcgggagcgtacctatgaactg
gcgctgctcaacagccaactgctggaggccaaggcccaggaggaaatggccaatgcctcc
aagagccgtttccttgccgccgtgggccatgatttgatgcagcccctcaacgccgcgcgg
ttgtttaccgccagcctgtcccagtaccccaagctcgatcaggaggcgcgcaccaccttg
tcccatgtgaacagttcgctgcgcattgccggtgaactgctgacggatctgttggatatt
tccaaactggattcggggatggtggaagtcaatcgccgtgattttgccgtggccgatctg
ctcaatggcctggcggtggagtttgacgccatggcgaccgaccatggtatccgttttgcc
atggtgccgagtacggcaaccatcaactcggatcctgcgctgctcaggcgggtgctgcaa
aacttcctcaccaacgcctaccgctatgccaaggggggcagggtgctcctcggttgtcgc
cacagggacaaggccctggaaattcaggtgctggataccggctgcggcatagatgaaaaa
gagctttatgaaatattcaaggaattcaaacggctgaacaatccaaacagtcagggtgtc
agcggcttgggactgggactggccattgccgacaggataagcaaggtgctgaaccatgaa
atccgggtcacttcggtgctgggtaagggttccttgttttccatcctggtgccgctcgga
gaaaccgtcagccaggtacagcccagggccactccagctgtgcttaagccacttgccggc
gtcaaggtgctgtgcatagataacgaggaggccattttggcggggctggagagcctgctc
agccgctggcactgcgaggtgatctgtgcccgggatctgggggatgcgcgcatcaagctc
ggtctcaagggcgtggcgccggacatagtgctggccgactaccacctggatgatggccag
aacggcgtggacgccatggatgggatccgtgccctctacggtcagcaactgccggggatc
cttatcaccgccaacacccgcaaggaattggttgaggatgtgcaacgccgtggctatcac
tacatggccaagatgatcaaaccggcctccctgcgggcactgatctccagcctggtgaag
gcggcctga
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