KEGG   Shewanella sedimentimangrovi: JYB85_10900
Entry
JYB85_10900       CDS       T07846                                 
Name
(GenBank) FAD-binding oxidoreductase
  KO
K21060  D-hydroxyproline dehydrogenase [EC:1.5.99.-]
Organism
ssem  Shewanella sedimentimangrovi
Pathway
ssem00470  D-Amino acid metabolism
ssem01100  Metabolic pathways
Module
ssem_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:ssem00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    JYB85_10900
SSDB
Motif
Pfam: DAO Pyr_redox_2 NAD_binding_8 FAD_binding_2 HI0933_like ApbA Pyr_redox FAD_binding_3 Pyr_redox_3 Thi4 FAD_oxidored GIDA UDPG_MGDP_dh_N MurD-like_N AlaDh_PNT_C 3HCDH_N KARI_N
Other DBs
NCBI-ProteinID: QSX39079
LinkDB
Position
complement(2502116..2503357)
AA seq 413 aa
MHKRVIVVGAGIVGLCCALDLRRKGFEVTVLDREGVAAGASSGNAGHFATEQVFPLADPA
MLPKLPGMLLDPLGPFRIKPAYFHRALPWFMRFLVNMLPSRRKHNGEAIAALNRRSIAAT
QALVDFCGCPELLVLKGSLLVFETRDKAVMEAEYHKYADAGVAVRLLSGDEVRQLEPSLS
PAITGALYFTEVGHTPDPKALCQAVAAKLLALGGKIEQQGVTTLLPGDGLGLVCDSGELL
ATDKLLIATGAWSKPLAKAAGNTVPLDTERGYHLMLPQQSGLGRPVASFDRKFIITPMTG
GTCLAGTVEFGGLEAPMSRERADCLLPHAKALLPKVFNDARVEQGERWMGFRPSLPDSLP
VLGPSGKAGVFFAFGHQHLGLTWAAVTGELISTLMAGDEPELDLGPYSANRFD
NT seq 1242 nt   +upstreamnt  +downstreamnt
atgcacaagcgcgtcatagtggtcggcgccggcatagtgggcttgtgctgcgccctggat
ttgcggcgcaagggttttgaggtcacagtgctggaccgggaaggagtcgctgctggggca
tcaagcggcaacgccggacattttgccaccgagcaagtatttcccctggccgatcccgcc
atgttgcccaagttgccgggcatgttgctcgatcccctggggccatttcggataaagccc
gcctatttccaccgggccttgccctggtttatgcgttttctggtcaatatgttgccatca
agaaggaagcacaatggcgaggccatagccgccctcaatcgccgctcaattgctgccacc
caggccctggtggacttttgtggctgcccggaattgctggtgctcaagggctcgttgctg
gtgttcgaaacccgggataaagctgtgatggaggccgaataccacaagtacgccgatgcc
ggggtggcggtcaggctgctcagcggcgatgaggtgcggcaattggagccgagcctatcc
ccggccatcaccggcgccttgtattttaccgaggtgggccatacgccggatcccaaggcc
ctgtgccaggcggtggccgccaagctgctcgccctggggggcaagatagaacaacaaggc
gttaccactctgctgccgggggacggacttgggcttgtctgtgactcgggtgaattactg
gcaaccgacaagctgctgattgccaccggagcctggtccaagcctctggcaaaggcggca
gggaacactgtgcccctggataccgagcgcggttaccatctgatgctgccacagcaaagt
ggcctcggtcgtcctgtggcctcgttcgatcgcaagttcatcattacccccatgacaggg
ggcacttgcctcgcgggcacggtggaatttggcggccttgaggctcccatgtcgcgggag
cgggccgattgcctgctgccacacgccaaggcgctgctgccgaaggtgttcaatgatgcc
agggtagagcagggggagcgctggatgggcttcagaccctctttgcccgacagtttgccg
gtgctggggccgagcggcaaagcgggggtgttttttgcctttggccatcagcatctgggc
ttgacctgggcggcggtcacgggggagctgatatcgaccctgatggccggtgatgaacct
gagctggatcttgggccttacagcgccaatcgtttcgattaa

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