Shewanella sedimentimangrovi: JYB85_10900
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Entry
JYB85_10900 CDS
T07846
Name
(GenBank) FAD-binding oxidoreductase
KO
K21060
D-hydroxyproline dehydrogenase [EC:1.5.99.-]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem00470
D-Amino acid metabolism
ssem01100
Metabolic pathways
Module
ssem_M00948
Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JYB85_10900
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Motif
Pfam:
DAO
Pyr_redox_2
NAD_binding_8
FAD_binding_2
HI0933_like
ApbA
Pyr_redox
FAD_binding_3
Pyr_redox_3
Thi4
FAD_oxidored
GIDA
UDPG_MGDP_dh_N
MurD-like_N
AlaDh_PNT_C
3HCDH_N
KARI_N
Motif
Other DBs
NCBI-ProteinID:
QSX39079
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Position
complement(2502116..2503357)
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AA seq
413 aa
AA seq
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MHKRVIVVGAGIVGLCCALDLRRKGFEVTVLDREGVAAGASSGNAGHFATEQVFPLADPA
MLPKLPGMLLDPLGPFRIKPAYFHRALPWFMRFLVNMLPSRRKHNGEAIAALNRRSIAAT
QALVDFCGCPELLVLKGSLLVFETRDKAVMEAEYHKYADAGVAVRLLSGDEVRQLEPSLS
PAITGALYFTEVGHTPDPKALCQAVAAKLLALGGKIEQQGVTTLLPGDGLGLVCDSGELL
ATDKLLIATGAWSKPLAKAAGNTVPLDTERGYHLMLPQQSGLGRPVASFDRKFIITPMTG
GTCLAGTVEFGGLEAPMSRERADCLLPHAKALLPKVFNDARVEQGERWMGFRPSLPDSLP
VLGPSGKAGVFFAFGHQHLGLTWAAVTGELISTLMAGDEPELDLGPYSANRFD
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgcacaagcgcgtcatagtggtcggcgccggcatagtgggcttgtgctgcgccctggat
ttgcggcgcaagggttttgaggtcacagtgctggaccgggaaggagtcgctgctggggca
tcaagcggcaacgccggacattttgccaccgagcaagtatttcccctggccgatcccgcc
atgttgcccaagttgccgggcatgttgctcgatcccctggggccatttcggataaagccc
gcctatttccaccgggccttgccctggtttatgcgttttctggtcaatatgttgccatca
agaaggaagcacaatggcgaggccatagccgccctcaatcgccgctcaattgctgccacc
caggccctggtggacttttgtggctgcccggaattgctggtgctcaagggctcgttgctg
gtgttcgaaacccgggataaagctgtgatggaggccgaataccacaagtacgccgatgcc
ggggtggcggtcaggctgctcagcggcgatgaggtgcggcaattggagccgagcctatcc
ccggccatcaccggcgccttgtattttaccgaggtgggccatacgccggatcccaaggcc
ctgtgccaggcggtggccgccaagctgctcgccctggggggcaagatagaacaacaaggc
gttaccactctgctgccgggggacggacttgggcttgtctgtgactcgggtgaattactg
gcaaccgacaagctgctgattgccaccggagcctggtccaagcctctggcaaaggcggca
gggaacactgtgcccctggataccgagcgcggttaccatctgatgctgccacagcaaagt
ggcctcggtcgtcctgtggcctcgttcgatcgcaagttcatcattacccccatgacaggg
ggcacttgcctcgcgggcacggtggaatttggcggccttgaggctcccatgtcgcgggag
cgggccgattgcctgctgccacacgccaaggcgctgctgccgaaggtgttcaatgatgcc
agggtagagcagggggagcgctggatgggcttcagaccctctttgcccgacagtttgccg
gtgctggggccgagcggcaaagcgggggtgttttttgcctttggccatcagcatctgggc
ttgacctgggcggcggtcacgggggagctgatatcgaccctgatggccggtgatgaacct
gagctggatcttgggccttacagcgccaatcgtttcgattaa
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