Shewanella sedimentimangrovi: JYB85_11420
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Entry
JYB85_11420 CDS
T07846
Name
(GenBank) VWA domain-containing protein
KO
K07114
Ca-activated chloride channel homolog
Organism
ssem
Shewanella sedimentimangrovi
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssem02000
]
JYB85_11420
Transporters [BR:
ssem02000
]
Other transporters
Pores ion channels [TC:
1
]
JYB85_11420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_2
TPR_1
TPR_2
TPR_11
TPR_16
TPR_12
TPR_14
TPR_Slam
TPR_6
TPR_10
ANAPC3
TPR_7
TPR_9
TPR_8
Motif
Other DBs
NCBI-ProteinID:
QSX35961
LinkDB
All DBs
Position
2628525..2630510
Genome browser
AA seq
661 aa
AA seq
DB search
MSLHFIRPWWLLALLPLLALLWWLYRHRSSRGTWNAYIAPHLAALLLSGTNSARPKGMGM
LGAAWVIAVLALSGPAVQKQTLPVFATDAGRVLLMDMSLSMYATDLAPNRLTQAKFRATD
LIRSLSDGETGLVAYAGDAFTIAPLTRDSNTLLNLLPTLSPDIMPVRGSSLSQGVRRAIE
LLQQGGHLKGDIVLLTDGINEDEYRETRELLDGSHYRLSILAFGTPQGAPIRLPDGNLLR
DAGNELVIVKTDLVRLADLARKGDGMALAARNDGSELPQLLSWLERGTDAKATELTGDSW
QDLGPYIALLLLLPVLLSFRFGMPAAVLLACILPLGKSQAALFQTQDQQAMEAFKRGEFQ
QAADSFTLPAWRGAAHYRAGDYESALKDFEQDDSAMGLYNQGNSLMQLGQYQEAEKRYQQ
ALEKQPDLDAAKANAKLAEQLAKQPPQQQNGSGSDQNQSGDNDANDQQGQSGDNSANDDQ
QGQESQGSQQKGQGSGNQNPEQQESSSDNQGAGDDAAANDSQPQDGQEGQQQGESEQNSG
QGNSGSSQNNDAQMQADPNAADKQQQAGTQAAGTQAGAAEGEPEKAQSATQAVAGADKAS
EDGEKAAALAATEQPGQMSPQTERALRVINDDPSVLLRNKMQLEYQLRRARGEHRKEKEQ
W
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgcattttatccgcccctggtggctgttggcgctgctgcccttgctggcgctg
ctttggtggctgtaccgccatcgcagcagtcgcggaacctggaatgcttacattgcaccc
catctggccgccctgctgctgagcggcacaaacagcgcccgtcccaagggcatgggcatg
ctgggagcggcctgggtcatcgcagtgctggccctgtcaggacccgcggtgcaaaagcag
accttgcctgtgtttgctaccgatgccgggcgggtgctgctgatggacatgagtctgtcc
atgtatgccacggatctcgcccccaatcgcctgacccaggcgaaattccgcgccaccgac
cttattcgctccctgtcggatggtgaaaccggcctggtggcctatgccggggatgccttt
accattgcgccgctgacccgcgacagcaataccctgctgaatctgttgcctaccctgtca
cctgacatcatgccggtgcgcggctccagtctcagccagggcgtgcgccgggccattgaa
ttgttgcaacagggtggccacctcaagggtgacattgtgctgctgaccgatgggatcaac
gaagacgaatatcgcgagacccgcgaactgcttgatggcagccactatcgcctgtctatc
ctggccttcggtaccccacagggagcccccatcaggttgcccgatggcaatttgctgcgc
gatgccggcaatgagctggtcatagtcaaaaccgatttggtcaggctcgccgatcttgcc
cgcaaaggcgatggcatggcgctggcggcgagaaatgacggcagcgaattaccacaatta
ctgagctggcttgagcgcggcacagatgccaaggccacagaactgaccggtgacagctgg
caggatctcggtccctacattgccctgctgctgttgctgccggtgctgctcagtttccgc
ttcggcatgccggccgccgtgctgcttgcctgtatcttgccactgggcaagagccaggcc
gccctgtttcagacccaggatcaacaagcaatggaggcatttaaacggggcgaattccag
caggcggcggacagcttcaccctgcccgcctggcgtggggctgcccattatcgggccgga
gattacgagtccgccctcaaggattttgagcaggacgactccgccatgggcctctataac
cagggcaacagcctgatgcagctggggcaatatcaggaggcggaaaaacgctaccaacag
gcattggaaaagcaaccggatttggacgcggccaaggccaatgccaagctggcggaacaa
ctcgccaagcagcccccccagcagcaaaacggctcgggctcggaccagaaccaatcgggc
gataatgacgccaatgaccaacagggtcagtcgggtgataatagcgccaatgatgatcaa
cagggacaagagtctcagggaagtcagcaaaagggtcagggttcgggaaaccaaaacccg
gagcaacaggaatcctcatccgacaaccaaggcgccggggatgatgctgcggcaaatgac
agtcaaccgcaggatggacaagaagggcagcagcaaggggagtccgagcagaacagcggg
caaggcaactccggcagcagtcaaaacaacgacgcgcaaatgcaggctgaccccaacgcc
gctgacaaacaacagcaagcaggcacgcaagcagccgggactcaagccggggccgccgaa
ggagagccggaaaaggcacagtcggccacacaggccgtggccggcgctgacaaggcatca
gaggatggggaaaaagcggccgccctggcagcaaccgaacaacccggacaaatgtcaccc
cagactgagcgtgccctgcgggtgatcaatgacgacccctcggtgctgctgcgcaataag
atgcaacttgaatatcaactgcgccgggcgcgcggtgaacacaggaaggaaaaggaacag
tggtaa
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