Shewanella sedimentimangrovi: JYB85_11590
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Entry
JYB85_11590 CDS
T07846
Name
(GenBank) ABC transporter ATP-binding protein
KO
K18893
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JYB85_11590
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssem02000
]
JYB85_11590
Transporters [BR:
ssem02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
JYB85_11590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
RsgA_GTPase
MMR_HSR1
AAA_22
AAA_29
AAA_16
DUF6338
DUF87
Septin
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
QSX35991
LinkDB
All DBs
Position
2665123..2666961
Genome browser
AA seq
612 aa
AA seq
DB search
MDKLFSRFERWTNPLPADEATQPPRGLYAFCRHYTRGFELQLIIMSVLTALLAMLEVSLF
GFMGQLVDWLVDKDPSTLFAEEGRTLLWMTLLLLVAIPVLVLLHALIVYQSLLGNYPMAI
RWLAHRYLLRQSVSFYHNDFAGRIATKVMQTALAVRETVMKLLDVLVYILVYFTTMVVMI
AKADLRLVLPMLLWLCCYIGLQWYFVPRLKKVATEQADARSTMTGRIVDSYTNITTVKLF
AHTQREADYAQSSMEGFLQTVYRQMRLVTGINVSVQILNYLLVFCVAAMSIWLWSESAIT
IGAIAIAVSLALRLNGMSQWIMWEVSSLFENIGTVADGMNTLSKPTQIQDAPDAPPLKVK
HGQIDIRNVSFHYGESHGVIEGLDLSIAAGEKVGLVGRSGAGKSTLVNLLMRFHDVERGE
ICIDGQNITQVNQDSLRAHIGMVTQDTSLLHRSIRENILYGRPDASEEELLQAIRKAQAA
DFIAELSDPDGHQGLDAKVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEV
EAAIQESLYQLMEGKTVIAIAHRLSTIAAMDRLIVLDEGRIVEQGSHQQLVKSGGIYAQL
WAHQTGGFLGVE
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggataaacttttttcccgcttcgagcgctggaccaatccgctgccggccgatgaggcc
acgcagccgccccgcggcctatatgccttttgccgccattacacccgcggctttgaactg
cagttaattatcatgtcggtgctcaccgcactgctggccatgctggaagtgtcgctgttt
ggttttatgggccagctggtggattggctggtggacaaggatcccagcaccctgttcgcc
gaggaaggccgaaccttgctgtggatgacgctgttgctgctggtagccattcccgtgttg
gtattgctgcacgcgctaattgtctaccagagcctgctcggcaactatcccatggccata
cgctggctggcacacagatatttactgcgccagagtgtgtctttctatcacaatgatttt
gcaggtcgcattgccaccaaggtcatgcaaacggcgctcgccgtacgggaaaccgtgatg
aaactgctggatgtgctggtctacatattggtgtatttcaccaccatggtggtgatgata
gccaaggccgatctgcgtctggtgctgccaatgctgctgtggctgtgctgctatatcggc
ctgcaatggtatttcgtgccacgcctgaaaaaggtcgccaccgaacaggccgatgcccgc
tccaccatgaccggccgcattgtcgacagctacaccaatatcaccacggttaaactgttc
gcccatacccaaagagaagccgattatgcccaatcctccatggagggctttctgcagact
gtgtaccggcagatgcgcctggtgaccggcatcaacgtcagcgtgcagatcctaaactac
ctgctggttttttgcgtcgccgccatgtccatttggctgtggagcgagagtgccatcacc
ataggcgccatcgccattgccgtcagcctggcactgcgactcaacggcatgtcccagtgg
atcatgtgggaagtcagctcgctgtttgaaaatatagggactgttgccgatggcatgaat
accctgtcgaagccaacccagatccaggatgcgcccgatgcgccgccactgaaagtcaaa
cacggccagatagacatacgtaacgtcagctttcactatggcgaatcacacggcgtcata
gagggactggatttatccatcgccgccggcgaaaaggtcggtctggtgggccgctccggc
gccggtaagtcaaccctggtgaatctgctgatgcgcttccacgatgtggagcgcggtgag
atctgcatcgatggccaaaatatcactcaggtcaatcaggattcactgcgggcccacata
ggcatggtgacccaggatacctcgttgctgcatcgctccattcgggagaacattctttat
ggtcgtcccgatgccagtgaagaagaattgctgcaggcgatacgcaaggcccaggcagca
gactttattgccgagttgtccgatcccgatggtcatcagggactggacgccaaggtggga
gagcgtggggtcaaactgtcgggcggccaaaggcaacgtattgcaatcgctagggtgctg
ctcaaggatgcgccgatattgatcctggacgaggccacctcggcactggattccgaagtg
gaagcggcgatccaggaaagtctgtatcaactgatggaaggcaagactgtgatagccatt
gcccaccgcctgtcgaccatagcggctatggatcgcctgatagtgctcgatgaaggcaga
attgttgaacaaggcagccaccagcagctggtgaaaagcggcggtatctatgcccagctt
tgggcacaccagaccggcggcttcctcggcgtcgaatga
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