Shewanella sedimentimangrovi: JYB85_11820
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Entry
JYB85_11820 CDS
T07846
Name
(GenBank) polysaccharide biosynthesis protein
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem00541
Biosynthesis of various nucleotide sugars
ssem00552
Teichoic acid biosynthesis
ssem01100
Metabolic pathways
ssem01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
JYB85_11820
00552 Teichoic acid biosynthesis
JYB85_11820
Enzymes [BR:
ssem01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
JYB85_11820
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Motif
Pfam:
Polysacc_synt_2
Epimerase
RmlD_sub_bind
CoA_binding_3
GDP_Man_Dehyd
3Beta_HSD
KR
adh_short
PglD_N
Motif
Other DBs
NCBI-ProteinID:
QSX36024
LinkDB
All DBs
Position
complement(2717784..2719739)
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AA seq
651 aa
AA seq
DB search
MKLFQFLFSLKRAHKRIVSVAVDSFFLVMSFWLALIVRLDSVNVVLNSQFWLLIALVCPM
SIIAFIKLGLYRAVLRYLGTQAMTAIVVGVAVSTLAMVCVAYFLSVDLPRTVPVIYASFA
LILVGGARAMMRSMVGNGISRRGEPVIIYGAGVSGRQTAMALSQSHEYHPLAFVDDDETL
HGTVIQGLHVHSPSIIRKLIKQKQATRVLLAMPSASRARRQHILQALEVLAVKVMTLPAM
ADLVSGNKLFSDVKEVEIEDLLGRDSVTPRSDLMASNITGKVVMVTGAGGSIGSELCRQI
IRLSPVKLVLFELSEFGLYSIERELQAIRNELGLTIDIFPMMGSVQRQNRVQAVMEAFKV
QTVYHAAAYKHVPLVEHNVVEGVRNNVFGTLYCAQAAIAAGVDTFVLISTDKAVRPTNVM
GTTKRMAELVLQALSKQHTSTRFCMVRFGNVLGSSGSVVPLFRKQIANGGPVTVTHPEIT
RFFMTIPEASQLVIQAGAMGKGGDVFVLDMGQSVKIVDLARKMIRLSGFEVKDEHNPDGD
IEIQFSGLRPGEKLYEELLIGDNVEGTDHERIMTANEVCLMWDDLKIVLDKLDMACHGFD
HESIRELMLKAPTGFNPTDGICDLVWLNRKSSDILNENGSSQTNNIVNLSR
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgaaactttttcagtttttattctcacttaagcgggcgcataaacgtattgttagcgtt
gcagtcgattcattttttttagtcatgtcattttggttggctttaatcgtaagactagac
tcggttaatgtggttcttaacagtcagttttggcttttgattgcgctggtctgcccgatg
agcatcattgcttttatcaagcttgggctttatcgagcggtgttgcgataccttgggacc
caagcgatgacggcaattgtggttggggttgctgtaagtactctggctatggtgtgtgtg
gcttattttttgtcggttgacctgcctcgtacagtgccggtaatttatgcatcttttgcc
ttgatactcgtcggtggggcgagagctatgatgcgttctatggtgggtaatggtataagt
cgccgaggggaaccggtcatcatttatggcgctggcgtgagtggcaggcaaacagcgatg
gctctttcacaaagtcacgaataccatccattagctttcgtagatgatgatgaaaccctg
catggcacagtaattcaaggtctgcatgttcattcgccttcgataattcgtaagctgatt
aagcaaaagcaggctacaagggtactgcttgctatgccaagtgcaagcagggcaaggcgt
caacatattttacaagcacttgaggttttagcggttaaagtaatgactttgccagccatg
gccgatttggtcagcggcaataagttgttcagtgatgtaaaggaagttgagattgaggat
ttactcggacgggactcggtaacgccacgttcggatttgatggcatcgaatattaccgga
aaagtcgtaatggtgactggtgccggcggttcaataggatccgagctttgtcgacaaatt
attagattgtctccagttaagttagttttgtttgaactgtcagaattcggtctttactcc
attgaacgcgaactgcaggctattagaaatgagctcggtctcactattgatatctttcct
atgatgggttcggtacagcggcaaaatcgtgttcaggccgtcatggaagcctttaaggta
caaactgtttatcatgcagcagcatataagcatgtgcctttggtcgagcacaatgttgtt
gaaggagtacgtaacaacgtttttggtacgctttattgtgctcaggccgcgatcgccgcc
ggagttgacacctttgtgctgatttcgacagataaagcggtacgcccaactaacgtaatg
ggcacaacaaagcgaatggccgaattagtactgcaggcgttatcaaaacagcacacctca
acccgtttttgtatggttcgtttcggaaatgtgcttggctcaagcggctcggtagtgcct
ttattccgtaagcaaatcgccaacggcggaccggtaactgtaactcatccagaaattact
cgttttttcatgactattccagaggcatcccagctagttattcaggctggcgctatgggt
aaggggggcgatgtgtttgttcttgatatggggcagtcagttaaaattgtcgatcttgcc
cgtaagatgatacgtttgtccggatttgaagtgaaggatgagcacaatcctgacggtgac
atagaaattcaattcagtggtcttcgtccaggcgagaagctttatgaagagctgttgatt
ggcgataacgttgaagggacagaccatgagcggataatgaccgcgaacgaagtttgtctc
atgtgggacgatcttaaaattgtgcttgataagcttgatatggcttgtcatggcttcgat
catgagtccatacgtgaacttatgcttaaggcgcccaccggttttaatcctaccgatggg
atttgcgatctcgtgtggttgaatcgaaaatcgtctgacattttaaatgaaaatggtagt
tcacaaaccaataatattgttaatttaagccgttaa
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