Shewanella sedimentimangrovi: JYB85_12450
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Entry
JYB85_12450 CDS
T07846
Symbol
bamB
Name
(GenBank) outer membrane protein assembly factor BamB
KO
K17713
outer membrane protein assembly factor BamB
Organism
ssem
Shewanella sedimentimangrovi
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssem02000
]
JYB85_12450 (bamB)
Transporters [BR:
ssem02000
]
Other transporters
Pores ion channels [TC:
1
]
JYB85_12450 (bamB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PQQ_2
Beta-prop_ACSF4
PQQ
Beta-prop_EMC1_N
DUF6906
Motif
Other DBs
NCBI-ProteinID:
QSX36143
UniProt:
A0ABX7QZV4
LinkDB
All DBs
Position
complement(2853426..2854613)
Genome browser
AA seq
395 aa
AA seq
DB search
MKSWCKNLLVAGLSLAALSACSSNDVEEEPVSELKEINATVFPQINWDEKVGSGVGDYYS
RLRPAVRYGKIFVADRYGEVTAFDEASGDKVWSQDFSELFRDNVLAKNKGARLAAGVTVA
QNKVFIGGESGLLGALDANTGEVVWYALAGGELLSAPTVADDMVVVNTGAGALEAFNIDT
GAKVWSYDNGLPNLTLRGTGAAAYEGGGFFVGTADGKVAVVIKQNGQPAWEQAIYSPSGG
NEFSRMADVDMTPLLIGDNLYAVSYNGNLVSMEARTGRVVWTRKYSSFNELASSGVQLYL
VDDHSRIYAIDRRNGLEMWSNSELSNRAVTSPEVFGDYLVVGDFEGYLHFIDRADGKLVG
RIEVDSSGLYGQPLVVDNKIYVQGRSGKVAIVTLP
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcttggtgcaaaaacctgctcgtagccgggctgagcttggctgccctgtcggcc
tgttcttccaacgatgtggaagaagaacccgtcagtgagctcaaggaaatcaatgccacc
gttttcccccagatcaactgggatgaaaaggtcggcagcggtgttggtgactattactcc
cgcctccgtcccgcggtgcgttacggcaaaattttcgttgccgatcgctacggtgaggtg
acggcctttgacgaggccagcggtgacaaggtctggtcccaggacttcagcgaactgttc
cgtgacaatgtgctggccaagaacaagggcgcccgtctggccgccggtgtcactgtagcc
cagaataaggtgttcattggcggcgagagcggcctcctgggtgccctggatgcgaatacc
ggcgaggtggtgtggtatgccttggccggaggcgagctgctgtcggccccaactgtcgcc
gacgacatggtggtggtgaataccggcgccggtgcccttgaggccttcaacatagacaca
ggcgccaaggtctggagctatgataacggtctgccgaatctgacgttgcgtggcacaggt
gccgcagcctatgaaggtggtggcttctttgtcggcaccgccgatggcaaggtggccgtg
gttatcaagcaaaacggtcagcccgcctgggaacaggccatctacagccccagcggtggc
aacgaattcagccgcatggccgacgtggatatgaccccgctgctgataggtgataacctg
tacgctgtcagctataacggtaacctggtttccatggaagcccgcactggccgagtggtg
tggacccgcaagtattccagcttcaacgagctggcaagctctggggtgcaactgtatctg
gtggatgaccacagccgcatctacgccatcgacaggcgcaacggtctggaaatgtggagc
aactcagagctcagcaaccgtgccgtgacatcacctgaggtgttcggtgattacctggtg
gttggtgatttcgaaggctatctgcactttatcgaccgtgccgatggcaagttggtgggt
cgcatcgaggtagacagcagcggcctgtatggccaaccgctggtggtggacaacaagatt
tatgtccagggccgcagcggcaaggtggccatagtcacacttccttaa
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