Shewanella sedimentimangrovi: JYB85_12555
Help
Entry
JYB85_12555 CDS
T07846
Name
(GenBank) malate synthase A
KO
K01638
malate synthase [EC:
2.3.3.9
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem00620
Pyruvate metabolism
ssem00630
Glyoxylate and dicarboxylate metabolism
ssem01100
Metabolic pathways
ssem01110
Biosynthesis of secondary metabolites
ssem01120
Microbial metabolism in diverse environments
ssem01200
Carbon metabolism
Module
ssem_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
JYB85_12555
00630 Glyoxylate and dicarboxylate metabolism
JYB85_12555
Enzymes [BR:
ssem01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.9 malate synthase
JYB85_12555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_TIM-barrel
MS_C
MS_N
HpcH_HpaI
Motif
Other DBs
NCBI-ProteinID:
QSX36163
LinkDB
All DBs
Position
complement(2873127..2874755)
Genome browser
AA seq
542 aa
AA seq
DB search
MEQSLATESKQQSLQITGPDIAGQEIVFTEGAVAFLHTLCDLYADEVEQLLEQRRERQSR
IDAGELPDFLPQTRAIRDGQWTIRGIPADLQDRRVEITGPVDRKMIINALNANVKVFMAD
FEDSLAPSWEKVVQGQLNLRDAVRGTISYTAPDTGKEYRLKEDPAVLIARVRGLHLKDKH
VLFNGKPIPGALLDFALYFYHNHHQLLAKGSGPYFYIPKLEGHLEARWWAKVFAFTEERF
CLAPGTIKCTCLIETLPAVFEMDEILFELRSNIVALNCGRWDYIFSYIKTLKNHPDRVLP
DRQQVTMDKPFLSAYSRLLVKTCHKRGALAMGGMAAFIPAKDEEANRQVLARVCRDKELE
ARNGHDGTWVAHPALADTAMSVFNGFIGEDHVNQLHITRDVDAPILASELLKPCDGERTE
SGMRLNIRIALQYLEAWISGNGCVPIYGLMEDAATAEISRASIWQWIHHGKSLANGKAVT
KGLFREMLVEELANVKEEVGSERFSHGRFTEAAVLLEEITTADELVDFLTLPGYELLTRS
EH
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggagcagagcttggctacagaatcaaaacagcagtcactgcaaattaccggacctgat
attgcgggtcaggaaattgtgttcaccgagggggcagtcgctttcttgcatactctgtgt
gacctatatgcagacgaggtggagcaactgctggagcagcgccgggagcgccaatcacgc
attgacgccggagagcttcctgactttttgccgcaaacccgtgccatcagagatggtcag
tggacgattcgtggcattccggccgaccttcaggaccgacgggtagaaatcaccgggccg
gtagatcgcaaaatgatcatcaacgccctcaatgccaacgtgaaagtgtttatggcggat
tttgaggactcgctggcccccagttgggaaaaagtggtacagggccagctgaatctgcgt
gatgcggtgcgtggcaccatcagctacaccgcaccggataccggcaaagagtatcgctta
aaggaagatccggccgtgcttatcgcccgggtcaggggactgcacctgaaagacaaacac
gtgttgtttaacggcaagcccattcccggtgcgctgctggacttcgctctttacttctat
cacaaccatcatcagttgctggccaagggcagtggaccttacttctatattcccaagctg
gagggccatctggaagcccgttggtgggccaaggtgtttgccttcaccgaagagcgtttt
tgtctggcgcctggcaccatcaaatgcacttgcctgattgaaaccctgcctgcggtgttt
gagatggatgagatcctgtttgagctgcgctccaacattgtggcactcaactgcggtcgt
tgggattatatcttcagctatatcaaaacgttgaaaaaccatcccgacagagtcttgccc
gaccgccagcaggtgaccatggataagccattcctcagtgcctattcccgattgctggtc
aaaacatgccataagcgtggcgcactggccatgggtgggatggcagcctttattcccgcc
aaggatgaagaagccaaccgtcaggtattggcccgggtgtgccgtgacaaggaactggag
gcccgtaacggccatgacggtacctgggtggcgcatccagctctcgccgacaccgccatg
agcgtattcaacggctttatcggggaagaccatgtcaatcaattgcatattacccgggat
gtcgatgcgccgattctggccagtgagttgctcaagccctgcgatggtgagcggacagaa
agcggtatgcggctcaacatacggatcgcgctgcaatatctggaagcctggatcagcggc
aatggctgcgtacccatctacggtctgatggaggatgccgcgacagccgagatctcacgg
gcttccatctggcagtggatccaccatggcaaaagtttggccaacggcaaggccgttacc
aaaggactgttccgcgagatgttggtggaggaactcgccaacgtcaaagaggaagtcggc
agcgagcgcttcagccacggccgatttaccgaggcggccgtgctactggaagagatcact
accgccgatgagctggtggattttctcaccttacccggctacgaactgctgacccgcagc
gaacactaa
DBGET
integrated database retrieval system