Shewanella sedimentimangrovi: JYB85_12775
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Entry
JYB85_12775 CDS
T07846
Name
(GenBank) RsmB/NOP family class I SAM-dependent RNA methyltransferase
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
ssem
Shewanella sedimentimangrovi
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssem03009
]
JYB85_12775
Enzymes [BR:
ssem01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
JYB85_12775
Ribosome biogenesis [BR:
ssem03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
JYB85_12775
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Ubie_methyltran
Methyltransf_31
Methyltransf_25
RsmF-B_ferredox
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
QSX39109
UniProt:
A0ABX7R6L1
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All DBs
Position
2916810..2918129
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AA seq
439 aa
AA seq
DB search
MLSAQVSPAEVAVKRAGSHSHTIKQLFNDIMESGQSADRVLAAYFKLNRKHGSKDRKLIR
ETLFALFRWWGWARKLPLEGDALWHGQLALCAALEQHPWEDIRAAWAMEAGWQQLALPGF
DTPSATALQLSQLLAPVQFHASDLVPDWFWPLLPPQDQAEREALLASLCKRPPIWARAQN
MDRDQAVSQLRALGIDASAAPYFSDALSLGSKSINLNEIVLYTSGKLEVQDLSSQVIGQV
SDPKPGESWWDACAGAGGKSLQLSSLMANRATSANAGQIVASDIRPQALEELGKRARRAG
FANISVARWRSDALPVDAGSFDGVLVDAPCSCTGTWRRNPDMRWLDSATAVTDKPELQLD
ILHRASAAVRKGGVLVYATCSLAEAENRAVAEAFLAAHPEFVPEEFTHPFSGERCTMATV
WPQQANSDGMFVARFRRLD
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
attttgagtgcacaagtttccccggccgaggttgccgttaaaagagcgggtagccacagc
cacaccatcaagcagcttttcaacgacataatggaaagtggccagagtgccgatagggtg
ctggccgcctatttcaagctcaatcgcaaacatggctccaaggacagaaagcttattcgt
gagaccctatttgccctgtttcgctggtggggctgggcccgcaaactgccccttgagggc
gatgcactttggcacgggcaattggccctgtgtgccgcgctggagcaacatccctgggaa
gacattcgcgccgcctgggccatggaggccggttggcagcaactggcactgcccggcttt
gatacgccctcagccaccgctctgcagctgagccaactgctggcgccggtgcaatttcat
gcaagcgatctggtgcccgactggttctggcccctgctgccaccccaggatcaagcagag
cgtgaggctttgcttgccagcctgtgcaaacgcccgcccatttgggcccgtgcccagaac
atggatcgcgatcaggctgtaagccaattgcgcgccctcggcatagacgccagcgcggcc
ccctatttcagcgatgccctgagccttggcagcaagagcatcaatctcaatgaaattgtc
ctctacacaagtggcaaattggaggtgcaggatctgtcctcccaggtgataggccaggtc
agtgaccccaagccgggtgagtcctggtgggatgcctgcgccggtgccggtggcaaaagc
ctgcaactcagctcgctgatggccaacagagctacatcggccaatgcaggccaaatcgtc
gcctcggatatccgcccccaggccttggaagagctgggcaagcgagcccggcgcgccggt
tttgccaacatcagcgtcgcccgttggcgcagtgacgccctgccggtggatgcaggcagt
tttgatggcgtgttggtggatgccccctgcagttgcaccggcacctggcgccgcaatccg
gacatgcgctggctggactcggccaccgcggtcactgacaaacctgaactgcagttggac
atactgcaccgtgccagtgccgcggtcagaaaaggcggcgtactggtgtatgccacctgc
tccctggccgaggcggaaaaccgggccgtggccgaggcgtttctcgctgcgcaccccgaa
tttgttcccgaggaattcacccatcccttcagtggcgagcgctgcactatggccacggtc
tggccgcagcaagccaacagcgacggcatgttcgtcgcccgctttcggcgcctggattga
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