Shewanella sedimentimangrovi: JYB85_12900
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Entry
JYB85_12900 CDS
T07846
Name
(GenBank) sodium ion-translocating decarboxylase subunit beta
KO
K20509
carboxybiotin decarboxylase [EC:
7.2.4.1
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem00362
Benzoate degradation
ssem00620
Pyruvate metabolism
ssem00650
Butanoate metabolism
ssem01100
Metabolic pathways
ssem01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
JYB85_12900
00650 Butanoate metabolism
JYB85_12900
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
JYB85_12900
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssem02000
]
JYB85_12900
Enzymes [BR:
ssem01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.4 Linked to decarboxylation
7.2.4.1 carboxybiotin decarboxylase
JYB85_12900
Transporters [BR:
ssem02000
]
Other transporters
Primary active transporters [TC:
3
]
JYB85_12900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OAD_beta
Motif
Other DBs
NCBI-ProteinID:
QSX36223
LinkDB
All DBs
Position
complement(2945899..2947029)
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AA seq
376 aa
AA seq
DB search
MDGLLAFWAETGLAHFSAGQALMMAVGGLLLYLAIVRGFEPLLLLPIGFGAVLANIPNAG
FTEEGGLLYYAYHVGIETGVFPLLIFMGVGALTDFGALIANPKTLLLGAAAQFGIFATLI
GAIALNLVPGFEFSLKDAAAIAIIGGADGPTAIFLASKLAPELLGAIAVAAYSYMALVPI
IQPPIMRALTTPQERAIKMEQLREVSKQEKIIFPLMVLGLTILFLPAATPLVGMFCLGNL
MRESGVVDRLSNTAQNELINIVTIFLGLAVGSKLSAAQFLRMETLGILVLGAIAFAIGTA
AGVLMAKLMCKLSGGKVNPLIGAAGVSAVPMAARVANKVGLEANPHNYLLMHAMGPNVAG
VLGSAVAAGILLAVLG
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggatggattgctggccttctgggccgagacgggcctggcccacttcagcgccggtcag
gcacttatgatggctgtgggtggcctgttactttacctggccatagtgcggggatttgag
ccgctgctgttgttgcccataggctttggtgccgtgctggccaacatccccaatgccggc
tttaccgaagagggtggcctcttgtactacgcctatcatgtgggcatagaaaccggggtg
tttcccttgctgatctttatgggggtgggtgccctgacggactttggggcgcttatcgcc
aaccccaaaaccttgttactgggggcggccgcccaattcggcatttttgcgactctcatc
ggtgccattgccctgaacctggtgcctgggtttgaattcagccttaaggatgcggcggcc
atcgccatcataggcggcgccgacggtccgacggcaattttcctggcttccaaactggcg
cctgagctattgggggccattgccgtggcggcctattcctatatggcactggtgcccatc
atacaaccgccgattatgcgcgccctgaccacgcctcaggagcgggccatcaagatggag
cagctgcgggaagtcagcaaacaggagaaaattatttttccgctgatggtactgggcctg
acaattctgtttctgccggcggccacgcccctggtgggcatgttttgcctggggaacctg
atgcgcgagtccggggtcgtggacaggctgtccaataccgcccaaaacgagcttatcaac
atagtgaccatatttctcggcttggcggtgggctccaaactgtcggcggcgcagtttttg
cgcatggaaaccctggggatcctggtgcttggagccatagcctttgccattggcaccgcg
gccggggtattgatggccaagctgatgtgcaaactcagtggtggcaaggtcaatccgctc
ataggtgctgcaggggtgtcggctgtgcccatggcggcgagggtggccaataaagtggga
ctggaagccaatccccacaattacctgttgatgcatgccatgggccccaatgtggccggt
gtgctgggcagtgcggtggcagcgggtatcttgcttgcggtactgggctga
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