Shewanella sedimentimangrovi: JYB85_12990
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Entry
JYB85_12990 CDS
T07846
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
JYB85_12990 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssem03400
]
JYB85_12990 (mutS)
DNA repair and recombination proteins [BR:
ssem03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
JYB85_12990 (mutS)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
Motif
Other DBs
NCBI-ProteinID:
QSX36230
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Position
2958155..2960737
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AA seq
860 aa
AA seq
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MNSTDFDDLEKHTPMMRQYLTMKAAHPDMLLFYRMGDFYELFYEDAKRASQMLGISLTAR
GKSGGDPIPMAGIPYHAVEGYLAKLVQIGQSVAICEQIGDPATSKGPVERKVVRVVTPGT
LTDEALLQERQDNLLAAVYQGKVGFGYATLDVASGRFVVAELDSREALEAELQRTSPAEL
LYSEDFAELVLINHFKGKRRRPEWEFDYDTCVKLLLEQFGTRDLRGFGITDARLSLQAAG
CLMQYVRDTQRTALPHINSIVRFNQSDAIVLDAATRRNLELTQNLSGGRDSTLASVLDNT
ATAMGSRMLQRWIHQPLRNRTHIESRQGAVTELLDTQGFEALSHTLRNLGDIERILARLA
LRSARPRDFARLRDALGLLPELKQHLEASQSQHLRQLALLLGEFPAEQDLLERAIVDNPP
MLIRDGGVIRPGYNAELDEWRGLSEGATDYLQQLEIREKERSGIATLKVGYNRVHGYYIE
VSRAQSALVPLSYQRRQTLKNTERYITPELKEYEEKVLSSQGKALALEKQLWDELFDLVL
PRLHDLQAFARAAAELDVLANFAERAETLGYQCPELSDRTGILIEAGRHPVVERVNQTPF
IPNPVELSNERRMLVVTGPNMGGKSTYMRQVALITLMAHIGCFVPAQRAIIGPVDRIFTR
IGASDDLASGRSTFMVEMTETANILHNASANSLVLMDEIGRGTSTYDGLSLAWAAAEYLA
QRLGAMTLFATHYFELTQLPELIAGVHNVHLDAVEHDDTIAFMHAVQEGAASKSYGLQVA
ALAGVPSQVIALAKHKLHQLENRDHQVPTSGKQNLAQQSLALSLPAEPSAAEARLKQLKP
DELSPRQALDLLYELKALVK
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcacagatttcgacgatttggaaaaacacactcccatgatgcgtcagtacctg
acgatgaaggcagcccatccggatatgctgctgttttaccgcatgggtgatttttatgaa
ctcttctatgaggatgccaaacgcgcctcgcagatgctgggcatttccctcaccgcccgc
ggtaagagcggcggcgatcccatccccatggccggtatcccctatcatgcggtggaaggc
tatctggcaaagctggtgcaaattggccagtcggtggccatctgcgaacagataggtgac
cccgccaccagcaagggaccggtggagcgcaaggtggtgcgggtggtcacgcccggcacc
ctgaccgatgaagctctgctacaggagcgccaggacaacctgctggccgccgtctatcag
ggcaaggtcggtttcggctatgccaccctggatgtggcctcgggccgctttgtggtggcc
gaactcgacagccgtgaggctctggaggcagagttgcaacggaccagtccggccgaactc
ctgtacagcgaagattttgccgagctggtactgattaaccatttcaagggcaagcgccgc
cgtcccgaatgggaatttgactatgacacctgcgtcaaattgctgctggagcaatttggt
acccgggacttgcgtggctttggcattaccgatgcgcgcctgtcactgcaggcagccggc
tgcctgatgcaatatgtacgcgatacccagcgcaccgccctgccccacatcaattccata
gtgcgctttaaccagagcgacgccatagtgctggacgcggcgacccgccgcaatctggaa
ctgacgcagaacctctcaggtggtcgcgacagcaccctggcgagcgtgctcgacaatacc
gccaccgccatgggcagtcgcatgttacagcgctggatccatcaaccactgcgcaacaga
acacacattgaatcccgtcagggcgcggtgaccgaactcttggacactcaaggctttgaa
gcactcagccacacgctgcggaacttaggggatattgagcggatcctcgcccgtctggcg
cttcgaagcgccagacccagggattttgccaggcttcgggatgcactgggactcttgccc
gaactcaaacaacatctcgaagcaagccaaagtcagcacctgcgacaactggcgctgctg
ctgggggaattcccggcggagcaggatttgctggagcgtgccatagtcgacaacccgccg
atgcttatccgcgatggcggcgtgatccgtcccggctacaacgccgaactcgacgagtgg
cgcggtctcagcgaaggtgcgaccgactatttgcagcagctggaaattcgcgagaaggaa
cgctccggaatagccacccttaaagttggctataaccgcgtccatggctattacatagaa
gtcagccgagctcagtcggcgctggtgcccttgtcgtaccaaagacgccaaaccctgaag
aacacagagcgctatatcacccccgagctcaaggaatacgaggaaaaggttttgtccagc
cagggcaaggcgctggcgctggaaaaacagctgtgggatgagcttttcgatctggtgctg
ccaaggctgcacgatctgcaggcctttgcccgcgccgcggcggaactggacgtgctggcc
aacttcgccgagcgcgccgaaacccttggctatcaatgcccggaactgagcgacagaacc
ggaattttgattgaggccggtcgccaccccgtggtggagagggtcaaccagacacccttt
attcccaatccggtggagctctcaaacgagcggcgcatgctggtggtgaccggccccaac
atgggcggtaagtccacctacatgcgccaggtggcactgatcaccctgatggcccacata
ggctgctttgtgccggcacagcgggccattattggcccggtggacaggatcttcacccgc
atcggcgccagcgatgatctggcctccggccgctccaccttcatggtggaaatgaccgag
accgccaacatattgcacaacgccagtgccaacagcctggtgctgatggacgaaattggg
cgcggcacctccacctatgatggcctgtcactggcctgggcggcggccgagtacctggcc
cagcgtctgggcgccatgaccctgttcgccacccactattttgaactgacccagttgcct
gagctgattgccggagtccacaacgtacatctggatgcggtggaacacgacgacaccatt
gcctttatgcacgcggtgcaggaaggcgccgccagcaagagctatggcttgcaggtggca
gcgctggcgggggtgccgagtcaggtgatcgccttggccaagcacaagttgcatcagttg
gagaaccgggatcaccaggtaccgacatcgggtaagcaaaatctggctcaacagagcctg
gccttgagtctgccggccgagccatcggcggccgaagccaggctcaagcagctgaagccg
gacgaactcagcccacgtcaggcgctggatttgctctatgaactcaaggccttggtaaaa
tag
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