Shewanella sedimentimangrovi: JYB85_13020
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Entry
JYB85_13020 CDS
T07846
Symbol
ispF
Name
(GenBank) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
KO
K01770
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
4.6.1.12
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem00900
Terpenoid backbone biosynthesis
ssem01100
Metabolic pathways
ssem01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
JYB85_13020 (ispF)
Enzymes [BR:
ssem01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
JYB85_13020 (ispF)
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Paralog
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GFIT
Motif
Pfam:
YgbB
Motif
Other DBs
NCBI-ProteinID:
QSX36236
LinkDB
All DBs
Position
complement(2965275..2965760)
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AA seq
161 aa
AA seq
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MKFRIGHGFDVHKFGGNKPLMLGGVQVPYECGLIAHSDGDVVLHSICDALLGAMALGDIG
RHFPDTDEAWKGADSRKLLRHCMGLARDKGYCLGNLDVTIIAQAPKMAPHINAMRAVLAA
DLQAELDDINVKATTTEKLGFTGRKEGIAVEAVVLMLPASC
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcagaattggccacggctttgatgtgcacaaatttggtggcaacaagccgctg
atgctgggaggcgtgcaggtgccctatgaatgtggcctgatagcccactcggatggcgat
gtagtgctgcactccatttgtgatgccctgctgggggccatggcccttggcgacataggc
aggcactttcccgacactgatgaggcctggaagggcgcagacagccgcaaactgctgcgc
cactgcatgggattggcgagggacaagggttactgtttgggaaatctggatgtgaccatt
atcgctcaggcccccaagatggcgccccatataaatgcgatgcgtgccgtactggccgca
gatttacaggctgaacttgacgatatcaatgtcaaggcgaccaccacagaaaaactcggc
tttaccggccgcaaggaaggcattgccgttgaagccgtggtgctgatgctgcctgcctcc
tgctaa
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