Shewanella sedimentimangrovi: JYB85_13220
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Entry
JYB85_13220 CDS
T07846
Symbol
dinB
Name
(GenBank) DNA polymerase IV
KO
K02346
DNA polymerase IV [EC:
2.7.7.7
]
Organism
ssem
Shewanella sedimentimangrovi
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ssem03400
]
JYB85_13220 (dinB)
Enzymes [BR:
ssem01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JYB85_13220 (dinB)
DNA repair and recombination proteins [BR:
ssem03400
]
Prokaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
JYB85_13220 (dinB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
IMS_C
IMS_HHH_1
IMS_HHH
Cdd1
DUF637
Motif
Other DBs
NCBI-ProteinID:
QSX36273
LinkDB
All DBs
Position
complement(3012515..3013579)
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AA seq
354 aa
AA seq
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MKKIIHIDMDCFFAAVEMRDFPEYRDKPLAVGGASERRGVISTCNYEARRFGVRSAMATA
YAMRLCPDLILVPGRMEVYKQVSQQIRAIFDRYSDLIEPLSLDEAYLDVSDCQLHQGSAT
LIAEAIRADILAETGLTASAGVAPVKFLAKVASDLNKPNGQYVITPAAVAGFVSGLSLGK
IPGVGKVTQEKLKTLGLETCAQVQACSPAMLAQHFGKFGAVLWERAHGRDERGISPHRER
KSVGVETTLAKDIHSEADCLQVMASLIPELNRRIGRSGSARRIHKLVVKLKFSDFRQTTI
EQRADEPSVKLYQALLSQALTRAEGRGIRLVGIAVGLSASEACSERLTQLDLAL
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaaaaatcattcatatcgacatggactgcttttttgcggcggtggagatgcgcgac
tttcccgagtatcgcgacaagcccctggccgtcggcggtgccagcgaacgccgcggggtg
atcagtacctgtaattacgaggcgcgccgctttggtgtgcgttcggccatggccacagct
tacgccatgcgcctgtgtcccgaccttatcctggtgccgggacggatggaggtctacaag
caggtgtcgcagcagatccgcgccatcttcgaccgttacagcgacctgattgagcccctg
tcgctggatgaagcctatctggatgtcagtgactgccagttgcaccagggctcggccacc
ctgatagccgaggccatccgggccgatatcctggcggaaaccgggttgaccgcctcggcc
ggggtggcaccggttaagtttcttgccaaggtggcctcggatctcaacaaacccaacggc
caatacgtgataacaccggcggcggtggccgggtttgtcagtggcctgtcccttggcaag
atccccggtgtcggcaaggtaacccaggaaaaactcaaaaccctggggttggaaacctgt
gcccaggtgcaggcctgttcaccggccatgctggcacagcactttggcaaattcggcgcc
gtgctgtgggagcgggcccacggccgcgatgagcgcggcatctcgccccacagggagcgg
aaatccgttggcgtcgagaccacgctggcgaaggacattcacagtgaagcagattgcttg
caggtaatggcttcactgatccccgaactcaatcgtcgtataggtcgcagcggcagtgcc
cggcgtattcacaagctggtggtgaaactcaagttcagcgatttccgccagaccactata
gagcagcgtgccgacgagccctcggtgaagctgtaccaggccctgctgtcccaggcgctg
acccgcgccgaagggcgggggatacgcctggttgggatagccgtgggtctgtcggccagc
gaagcgtgcagcgagcgcctgacccagctggatttggcgctttaa
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