Shewanella sedimentimangrovi: JYB85_14565
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Entry
JYB85_14565 CDS
T07846
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem00550
Peptidoglycan biosynthesis
ssem01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JYB85_14565 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ssem01003
]
JYB85_14565 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ssem01011
]
JYB85_14565 (mrcB)
Enzymes [BR:
ssem01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
JYB85_14565 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
JYB85_14565 (mrcB)
Glycosyltransferases [BR:
ssem01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
JYB85_14565 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
ssem01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
JYB85_14565 (mrcB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
Transpeptidase
UB2H
Motif
Other DBs
NCBI-ProteinID:
QSX36496
UniProt:
A0ABX7QYA3
LinkDB
All DBs
Position
complement(3292893..3295199)
Genome browser
AA seq
768 aa
AA seq
DB search
MTVKKVSKKRGRTKAAAKPSWLKRSWSLGWKLALVAMAALVMYSIYLDQIIARKFEGQKW
YLPAQVFSRSMALYPGAAVSHAQLMDELKLLGYRKVANPRQVGEFSASSTRIDLWRRPFR
HPQGSKSAERVMISFNSDGVASVARQSDKRELAVFHLEPVLLDRIIAGDGEDRLFVPTAE
IPKSIVDALILVEDRSFYDHHGINPFAILRAAFVNISAGRTVQGGSTLTQQLAKNFFLSS
ERSLIRKLREALMAIIIDFRYSKDEILEAYLNEVYMGQDKSRAVHGMGLASQFYFGRPIA
ELTLAQQAFLVAVIKGPSYYNPWRFAERAQERRDLVLRLLMEAGKLSVQDYQVAAESPLG
LRRADKPVHQKLPAFFATVKQELAQRWGDSLLKTSGIKVYTTLDPVAQEAAEQAVRDTMK
RLGKDSPQLQAAMVVTDKYSGGIAAMVGDRHPDFEGYNRASEMRRPIGSLIKPFVYATAL
DQGDKYHLLTPIKDEPITLTNEQGKTWSPQNVDKQFSGQVSLLTAISKSMNVPTVNLGMA
IGVDSVATTMDKVGWTEPVNPYPSMLLGAVNGSPLMVAQIYQTLADNGRYRSLVAVTDVL
DSNNEPLAASRPSASQGLTPETAFLVQYAMTKVVSQGTAAKLGAAFPGQVLAGKTGTSND
SRDSWFAGFDERNVAAVWVGRDDNGKTSLYGSSGAMAIYQAFLQQRPPVSLRMTPENGIV
NGYFDPATGKAMEKQCRGVVAAPARAESWHPAANCGDPLPWWKRILGG
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgacagtaaagaaagtgagcaaaaaacgcggccgcaccaaggccgcagccaaaccctcc
tggcttaagcgcagctggtccctgggctggaagttggcccttgtcgccatggcggctctg
gtcatgtacagcatttatctcgaccagatcattgcccgcaagtttgagggccagaaatgg
tatttgccggcccaggtcttcagccgctccatggccctgtatcccggcgccgccgtgagt
cacgcccagttgatggacgaactcaagctgctgggttaccgcaaggtggccaatccgcgt
caggtgggggagttttccgcgtcaagcacgcgcatcgatctctggcgccgtcccttccgc
catccccaaggcagtaaaagtgccgagcgggtgatgataagctttaacagtgacggcgtg
gcctcagtggcgcgccagagcgataaacgcgagttggcggtattccatctggagccggta
ttgctggaccggatcatcgccggtgacggtgaggacaggttgtttgtgcccaccgccgag
atccccaagtccatagtggacgcgctgatcctggtggaagatcgcagcttctacgatcac
catggcatcaatccctttgccattttgcgggcggccttcgtcaatatcagtgccggccgc
acagtgcagggcggctcgaccctgacccagcagctggcgaaaaacttcttcctctccagc
gagcgctcccttatccgtaagctgcgcgaagccctgatggccatcatcatcgacttccgc
tacagcaaggacgagatccttgaggcctacctcaacgaggtctacatgggccaggacaag
tcccgcgccgtccacggcatgggtctggcgtcccagttctatttcggtcgccccatagcc
gagctgacgctggcgcagcaggcgtttctggtggcggtgatcaagggcccgtcctattac
aatccctggcgttttgccgagcgggcccaggagcggcgcgatctggtgctgcggctcttg
atggaggccggcaagctgtcggtacaggactatcaggtggcggccgagtcgccgctgggg
ctgcgccgggccgacaaaccggtgcatcaaaagttgccggccttcttcgccactgtgaag
caggaactggcccaacgttggggcgacagtctgctgaaaacctccggcatcaaggtttac
accacgctggatcccgtggcccaggaagcggcggagcaggcggtgcgtgacaccatgaag
cgtctgggcaaggacagtccccagctgcaggcggccatggtggtcaccgacaagtattcc
ggcggcatagccgccatggtgggcgaccgccatccggattttgaaggctataaccgggcc
agcgaaatgcgccgacccataggttcactgataaagcctttcgtctatgccacggcgctg
gatcagggcgacaagtatcacttgctgacccccatcaaggatgagcccatcaccctcacc
aacgagcagggcaagacctggtcaccgcaaaacgtcgacaagcagttcagcggccaggta
agcctgctcaccgccatcagcaagtcgatgaacgtgccgactgtgaacctgggcatggcc
ataggggtggattcggtggcaaccacaatggacaaggtgggttggactgaacccgtgaac
ccttatccttccatgctgctgggggcggtcaacggttcgcccttgatggtggcgcagatc
tatcaaaccctggccgacaatggtcgttaccgctcccttgtcgctgtgaccgatgtgctc
gacagcaacaatgagcccctggccgcaagccggccttcggccagccagggcttgacgccc
gaaaccgccttcctggtgcaatacgccatgaccaaggtggtcagtcagggcacggccgcc
aagctcggcgccgccttcccggggcaggtgctggcgggcaagacgggcaccagcaacgac
agtcgcgactcctggttcgccggttttgacgagcgtaacgtggcggccgtctgggtcggc
cgtgacgacaacggcaagaccagcctttatggttccagcggcgccatggccatctaccag
gccttcctgcagcaaaggccgccggtgagcctgaggatgacgccggagaacggcatagtg
aacggttacttcgatcccgccaccggcaaggcgatggaaaagcagtgccgaggtgtggtg
gcggccccagcacgggctgagagttggcatcccgctgccaattgcggcgatccgctgccc
tggtggaagcggatcctgggtggctaa
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