Shewanella sedimentimangrovi: JYB85_14710
Help
Entry
JYB85_14710 CDS
T07846
Name
(GenBank) RHS repeat protein
Organism
ssem
Shewanella sedimentimangrovi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
Motif
Other DBs
NCBI-ProteinID:
QSX36523
LinkDB
All DBs
Position
3326116..3330174
Genome browser
AA seq
1352 aa
AA seq
DB search
MLNMQNSLKLVGMCILFSYSDLALADLVCYRTVVAADGTAWPVRTTCDRTSQTAGSELTT
SLGSSESREGSNDSSNQDQQEGEGDSGCSKTAGNPIVIASGNKIQPEIDFVSGSAFPLTI
EKNYNHFAARTGVFGKMWLSSFDYKLLYTDRDTCLIDGEGMPSIGCDERFPSTPNAEDIL
TVLKPDGAKRVFEPSETPYVWHDNDFGNGATITYANGMFTLHEVDGMVEVYNGDGQVLSR
TSPAGYSHAFSYNNGLLTSVTASTGESLTLSYTGGLVTQITDSEGHSYLYAYTNGKLSKQ
TMPNGSYKEFFYTDANWPDALTMIKVNGAIYARFTYSPSSGKATSSGHGALGNIEEYSFA
YTTNKTTVTNPLGQVTDYNYTIINNKKRIVSVSRQGGQFCGAANQSYTYDNLGLQDKVTD
WDGKVTDYDYNNKGQLLSITQAYGTSDAVTTSYTWNTSFGHLPDSIETPYLLTEFTYDDK
QHVTQIKKTNLTSYGVPGEVRITDIDYTFHPNGRVASMTIDGPRTDVDDVSVTYYNDKGL
MTSMVDAIGNTRTFNSYDGNGNLTSETAPNGLVTTYTYDVNNRLQSVKQGTRVARTFTYN
ALGQLDKVTNPDGSYLDQAFDEGFRATSAVDNSGAIISTGFDAMSNPTSTSFKLGATTHF
SANVYYDELGRVRFKEGKNGQSETITYFDDGNIKDITDAKLNVTSFTYDNHGRLATSTDA
NNTVTTYGYNDQGLVTSVTDANNHVTSYQYDGFGQLTKLTSPDTGVTTFKYDPAGNLVEK
TDAKGIIYRYAYDALNRPTVTVAGNEMQAYEYDGNGDAGMLTRQADSSGCASYDYNTYGE
LIRKTNSIQGQNLITQYIPDGYGRLKDVIYPSGNKVTYGYNNIGKVSSVTAVIGGVSKTV
LSGVSYKPFGPASSWTYGNGLVQTDTYDQDYRLTDRDIAGKQDLHFGYDLANNITAINNA
YNSGYSQTFDYDNVYRLSSISSTADNQTLSYDDVGNRLTHSENGLNYSYSYKSGSNKLDK
VTRIGQTKTLLTDSNGNITSDNVRGNTYSYNGLNRMASLVKGGVTTSYGYNAMNQRMFKK
TGSSTERYVYDPSGLLLAEPNSAREYIYFNGMPVAYVKSNVLYFVHSDQLGRPELITDAA
KAVVWRANLKAFDRTVQTTSIGDFNLGFPGQYYDTESGLWYNWNRYYDAALGRYIQSDPI
GLAGGMNTYAYVGGNPVIGIDFTGLCDCGEIAKNQTPDGGEWDKRRVNNGASEVFRFGRW
NPTYRTPSNFISDYAENTFVATSGAALYTYLKTGAAEISLGAVAFGTFLGMGHAGVTDFK
NWQANIYTPEEQKVINSYNSTLVNCLKGGRGE
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atgttgaatatgcaaaatagtttgaaacttgttggtatgtgtatattgttttcttatagt
gatcttgctttggcggatctagtttgttaccgcacggtcgttgcagctgatggtactgcg
tggcccgttcgcacaacttgtgaccgcactagccagactgcaggttcagagttaaccaca
agtctagggtcatcggagagtcgagagggctcgaatgattctagcaatcaggatcaacaa
gagggcgaaggtgattcaggctgttctaaaaccgccggcaatcccatagtgattgcgtct
ggaaataaaattcagccggaaattgactttgtgtcaggctccgcattcccattaaccatc
gaaaaaaattacaaccattttgctgccagaaccggggtattcggcaaaatgtggctcagc
agctttgattataaattgctctacactgacagagacacttgcctcattgatggggaaggg
atgccttctatcggttgtgatgagagatttccatcaacaccgaatgctgaagatatactg
acagtattaaaacccgacggtgccaaaagggtgtttgaacccagtgagaccccttatgtg
tggcatgataatgatttcggcaatggtgccaccattacctatgccaacggcatgtttacc
ctacatgaagtagatggcatggtggaggtgtacaacggtgatggtcaggtgcttagccgc
accagcccagccggatactcgcacgctttcagctacaataatggtctgttaacttctgtc
actgcttcgaccggtgagagtctgacactttcatacactggggggcttgttacccagatt
accgatagtgaagggcatagctatctatatgcgtacaccaacggaaaactctccaagcaa
acgatgccgaatggcagttataaggagtttttctataccgatgccaattggcccgatgcc
ttaacgatgattaaggtgaatggagcaatctatgcgcgatttacctatagcccaagcagc
ggcaaggcgacgtccagcggacacggtgctctcggcaatatagaagaatacagttttgct
tataccactaataaaaccacagtcaccaatcccctggggcaggtcacggactacaactac
accataataaacaataaaaagcggatagtgtccgttagtcgccagggtgggcaattctgc
ggtgcagccaaccaaagctatacctatgacaacctgggattgcaggacaaggtcaccgat
tgggatggcaaggtcacggactatgactacaacaacaaaggacaactgctctcaataacc
caagcctacggcacatctgatgcggtcactaccagctatacctggaacacaagcttcggg
catctgccggacagcatagaaacaccttacctgctgaccgaatttacctacgatgataag
caacatgtaacccagataaagaaaaccaatctgacgagctatggtgttccgggagaagtg
cggattaccgacatagactacaccttccaccctaacggccgcgtggcaagcatgaccatt
gatgggccgcgaaccgatgtcgatgatgtctctgttacttattacaatgacaaaggcttg
atgaccagcatggtagatgccattggaaacacccgtacttttaacagctatgacggcaac
ggcaatctcacttcagaaacggcccctaatggcttggtgacaacatacacttacgacgtc
aataaccgactgcaaagcgtcaagcaaggcactcgtgtggccaggacctttacctacaat
gccctggggcaattggacaaggtcaccaatcccgacggctcctatctggaccaggcattc
gatgaaggcttccgggccaccagcgcggtggacaacagtggcgccataatatctaccggc
tttgacgccatgagcaacccaacctccaccagtttcaagctgggcgctacgacacatttt
agtgccaacgtttattatgatgagctgggccgggtgcgatttaaagaagggaaaaacggt
cagtccgaaaccatcacatacttcgatgatggcaacatcaaagatatcaccgatgccaag
ctgaatgtcaccagcttcacctatgacaatcatggccgcctggcgaccagtaccgatgcc
aacaataccgtcacgacctatggttacaatgaccaaggcttggtgaccagcgtcaccgac
gccaacaaccatgtgaccagctaccagtacgatggctttggccaactgaccaagctgacc
tctccggataccggtgtaaccaccttcaagtatgacccggccgggaatttggtggagaag
accgatgccaaagggattatctatcgctacgcatatgatgcgctcaatcggccaactgtc
acggtggccggcaatgagatgcaggcctatgagtatgacggcaatggtgacgccggcatg
ctcacccgccaagctgacagcagtggttgcgcaagctatgactacaacacctatggtgaa
ctgattagaaagaccaacagcatccaaggacagaacctgatcacccagtacatccccgac
ggctatggccgcctgaaggacgtcatctaccccagtggcaacaaggtgacctatggctac
aacaacataggcaaggtcagcagtgttaccgcagtaattggcggggtgagtaaaaccgtg
ctgtccggggtaagctataagccctttggcccggcaagcagttggacctatggtaacggc
ctggtacagaccgacacctacgaccaggactatcgcctaactgatagggacattgccggt
aagcaggacctgcatttcggttacgatttagccaacaacatcacggcaattaacaatgcc
tataacagcggctacagccagacgttcgactacgacaatgtttatcgcctgtcgtccatc
agcagcaccgcggataaccagacgctcagttacgatgatgtgggcaatcgcctgacccat
agtgaaaacggcttgaactatagctacagctacaaaagtggcagcaacaagctggataag
gtaacccgcattggccaaaccaaaacgctgctgaccgacagcaacggcaatatcacttcc
gacaacgtgcggggcaacacctatagctacaatggcttgaaccgaatggcatcgctggtg
aagggcggagtcaccaccagttatggttacaatgccatgaaccagcggatgtttaagaag
accggtagcagcaccgagcgttatgtctatgacccatcggggttgttgctggcagagcca
aacagtgccagggagtacatttacttcaacggtatgccggtagcctatgtcaagagcaat
gtgctgtactttgtgcacagtgaccaactcggcagacctgagctaatcaccgatgccgcc
aaggcggtggtgtggcgtgccaatttgaaggcatttgaccgcacagtgcaaactaccagc
ataggtgactttaacctcggcttcccagggcagtactatgacaccgagtcgggcctgtgg
tacaactggaaccgttactacgatgcggcgctgggcaggtatattcagagtgacccgatt
ggtctggctggtgggatgaatacctatgcttacgtaggggggaatccagtgataggaatt
gattttaccggcttgtgtgactgtggagaaattgccaaaaaccaaacaccagatggtggg
gaatgggataaacgacgtgttaataatggagctagcgaggtgttcagatttggacgttgg
aatcccacctatagaacacctagtaattttatttctgactacgcggagaatacttttgta
gctacatctggagcagcactttatacttacttaaaaacaggggcagcagagatttcatta
ggggcggtagcgtttggaacttttttaggtatggggcacgcaggagttacagattttaaa
aactggcaagctaacatatatactccagaagaacaaaaggttataaactcctacaattca
actttagtgaattgcctgaaaggaggtaggggtgaataa
DBGET
integrated database retrieval system
