Shewanella sedimentimangrovi: JYB85_14725
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Entry
JYB85_14725 CDS
T07846
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
ssem
Shewanella sedimentimangrovi
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssem03009
]
JYB85_14725
Enzymes [BR:
ssem01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
JYB85_14725
Ribosome biogenesis [BR:
ssem03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
JYB85_14725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QSX39146
LinkDB
All DBs
Position
3331451..3331867
Genome browser
AA seq
138 aa
AA seq
DB search
MDKDSRGLLLLSDDGELTQRLMHPDFHHPKHYEVELARPMDADFVTVMAAGMDYGEGQVR
QCQVRALSPTRFEIVLTQGKKRQIRRMCRHLGNRVVDLCRTRLMHLILADLPEGKYRPLT
NAEISELKASLAQLPELK
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
ctggacaaagactcccgcggcttgctgctgctcagcgacgatggcgagctgacccagcgt
ctgatgcacccggattttcatcaccccaaacactatgaggtggaattggcccggccaatg
gatgccgattttgtcaccgtcatggcagcaggtatggactatggtgaaggccaggtgcga
cagtgccaggtgcgggccctgagcccgacccgcttcgagatagtgttgactcagggtaag
aagcggcaaattcgccgcatgtgtcgccatttgggcaacagggtggtggatctgtgccgt
acccgtttaatgcacctgatactggcggacttgccggagggaaaatatcggcccttgacc
aatgccgaaataagcgaacttaaagcctcgctggcacaactcccagaattaaaatag
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