Shewanella sedimentimangrovi: JYB85_15425
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Entry
JYB85_15425 CDS
T07846
Symbol
rsgA
Name
(GenBank) small ribosomal subunit biogenesis GTPase RsgA
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem00730
Thiamine metabolism
ssem01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
JYB85_15425 (rsgA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssem03009
]
JYB85_15425 (rsgA)
Enzymes [BR:
ssem01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
JYB85_15425 (rsgA)
Ribosome biogenesis [BR:
ssem03009
]
Prokaryotic type
GTPases
JYB85_15425 (rsgA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
Myosin_N
AAA_16
AAA_29
AIG1
ABC_tran
AAA_7
nSTAND1
Roc
AAA_25
Septin
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
QSX36650
LinkDB
All DBs
Position
3470232..3471287
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AA seq
351 aa
AA seq
DB search
MSKKKPLSHGQLRRMRANHEKRLSRGSTENQLTEINDSSLGQEQAATVISRFGQHADVET
QDGEQVRCNIRRTIASLVTGDKVIVRLSTESGSAIGGVVEAVHPRHSTLTRPDLYDGVKI
IAANIDQILIVSSVVPAFTTQIIDRYLVAAEDTGIEPTIILNKTDLLPPEQEPEIEAALQ
RYQAIGYRVFRLSSKTGEGIDDIKHLLDGKVSIFVGQSGVGKSSIVNSLLPEAELLTGAV
SETSGLGQHTTTTSKLLHLPSGGDLIDSPGVREFALWHLPADRVGWCFVEFRDFLGTCKF
RDCKHLDDPGCALKVALAEGKISEDRFNNYHRIIASLDEQRHARYFRGSED
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaaaagaaacccctgagccacggtcaattgcgccggatgcgggccaatcacgag
aaacgcctgagccgcggcagcacggaaaatcaacttactgaaattaatgatagttccctc
ggccaggagcaggcggcaactgtgatttcccgtttcggtcaacacgccgatgtggagacc
caggacggcgagcaggttcgttgcaatatccgccgcaccatagccagcctggtaaccggc
gacaaggtcatagtgcgtctgagcacagagtctggttcagcaattggcggcgtggttgag
gccgtgcatccccgccactccaccctgacccgccccgacctctatgacggggtcaagatt
attgccgccaacatagaccagattttgatagtgtcttccgtggtaccggctttcaccacc
cagatcatcgatcgttatctggtggccgccgaagataccggcattgagcccaccatcata
ctgaacaagacagatctcttgccgccggaacaggagccggagatcgaggcagcgctgcaa
cgctatcaggccataggctaccgggtgtttcgcctcagcagcaaaaccggtgaaggtatc
gacgacatcaagcatttgctcgacggtaaggtcagcatctttgtcggccagtccggtgtt
ggcaagtcttccatagttaactcgctgctgccggaagccgaactgctcaccggcgccgta
tccgaaacctcggggctgggccagcacaccaccaccacctccaaattgctgcacttgccc
agcggcggcgatctgatagattctcccggcgtgcgcgaatttgccctctggcatctgccg
gcggacagggttggctggtgttttgtggagtttcgcgacttcctcggcacctgcaaattc
cgtgactgcaagcacctggacgatccgggttgtgccctgaaggttgccctggccgagggt
aagatcagcgaagacagattcaataattatcacaggatcatcgccagcctggacgaacag
cgccatgcccgctattttcgtggcagcgaagactaa
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