Shewanella sedimentimangrovi: JYB85_15535
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Entry
JYB85_15535 CDS
T07846
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JYB85_15535 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ssem03032
]
JYB85_15535 (dnaB)
Enzymes [BR:
ssem01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
JYB85_15535 (dnaB)
DNA replication proteins [BR:
ssem03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
JYB85_15535 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
AAA_33
divDNAB
DUF5410
CbiA
DUF1421
GvpD_P-loop
Motif
Other DBs
NCBI-ProteinID:
QSX36670
UniProt:
A0ABX7R0B9
LinkDB
All DBs
Position
3493261..3494667
Genome browser
AA seq
468 aa
AA seq
DB search
MSQQAAFKSKSPTRDAQLDAIKMPPHSIEAEQSVLGGLMLDSEAWDKVAEAVVREDFYSR
SHRMIFGAMQKLVEVGQPIDLITVSERLELNDELEDAGGFAYLGEIAKNTPSAGNILSYA
EIVRERAVVREMIRVAHEIADAGYNPEGRDSSALLDLAESKVFKIAEQRANANEGPEGIK
TILEKTVDKIEQLYNNPHNGVTGVSSGFSDLDRMTAGFQSGDLIIVAARPSMGKTTFAMN
LCEQAALNEGKPVLIFSLEMPSEQIMMRMLASLGRVDQTKIRTGQLDDDDWARVSSTMGI
MLEQGKMYIDDSSGLTPTEVRSRARRIAREYGGLSMIMVDYLQLMQVPALADNRTLEIAE
ISRSLKALAKELEIPVIALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEV
YHDDSPDKGTAEIIIGKQRNGPIGRVRLTFQGQFSRFDNYAGPQFEED
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaacaagccgcatttaagtctaagtcgcccacgcgggacgcccagctggatgcg
atcaaaatgccacctcactctatcgaggccgaacagtcggtactcggcggcctgatgctg
gattcagaggcctgggacaaggtggccgaggccgtggtacgggaagatttttactcccgt
tcccacaggatgatctttggcgccatgcaaaagctggtggaagtcggccagcctatcgac
ctgatcacagtatcagaacgactggagctgaacgacgaactggaagatgccggcggtttc
gcctacctgggtgaaattgccaagaacacccccagtgccggcaacatactctcctatgcc
gagattgttcgtgagcgggccgtggtgcgggagatgatccgcgtcgcccacgagattgcc
gacgcgggttacaacccggaaggccgggactccagcgccctgctggacctggctgaatcc
aaggttttcaagattgccgagcagcgggccaacgccaacgagggcccggaaggcatcaag
accattctcgaaaaaaccgtcgacaagattgagcagctgtacaacaacccacacaacggt
gtgaccggtgtgtccagtggcttctcggatctcgatcgcatgaccgccggcttccagtcc
ggggatctcatcatagtcgcggcccgtccgtccatgggtaagaccaccttcgccatgaac
ctgtgtgaacaggcggcccttaacgaaggtaaacccgtactgatcttcagtctcgagatg
ccctcggaacagatcatgatgcgtatgctggcctcactgggccgggtcgatcagaccaag
atacgtaccggtcagctggatgatgacgattgggcccgggtgtcatccaccatgggcatc
atgctcgaacagggcaagatgtatatagatgacagttcgggtctgacccccaccgaagtg
cgcagccgtgcccgtcgtatcgcccgggaatacggcggcctgtcgatgatcatggtcgac
tacctgcaattgatgcaggtgccggccctggccgacaaccggaccctggaaattgccgag
atctcccgctcgctcaaggctctggccaaggagctggaaattccggttatcgctctgtca
cagctgaaccgttcgctggaacaaagggccgataagcgcccggtgaactcggatctgcgt
gaatcgggctccattgagcaggacgcggatctcatcatgtttatttaccgcgatgaggtg
tatcacgacgactcaccggataagggcacggcggaaatcattattggtaagcagcgtaac
ggtcctattggccgggtgcgcctgaccttccagggacaattttcccgttttgacaattac
gccggtcctcagtttgaagaagactga
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