Shewanella sedimentimangrovi: JYB85_15540
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Entry
JYB85_15540 CDS
T07846
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem00470
D-Amino acid metabolism
ssem01100
Metabolic pathways
ssem01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JYB85_15540 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
JYB85_15540 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ssem01011
]
JYB85_15540 (alr)
Enzymes [BR:
ssem01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
JYB85_15540 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
ssem01011
]
Precursor biosynthesis
Racemase
JYB85_15540 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
QSX36671
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All DBs
Position
3494704..3495780
Genome browser
AA seq
358 aa
AA seq
DB search
MKPFPRAEISSSALKHNLARLRQLAPDSRVMAVVKANGYGHGLLNVAQCVADADGFGLAR
LEEALELRAGKVKAKLLLLEGFFRQEDLPLLIEHDIETVVHHESQLQMLESCTLSRPVTV
WLKLDSGMHRLGVTPERFHELYQRLLACPNVAKPIHLMTHFACSDEPDNDFTARQIKVFN
DLTRDLPGERTLANSAGALYWPESQGDWIRTGIALYGVSPVCGDLGSNHGLIPAMELVSQ
LIAVRDHSAGEPVGYGAAWTAPKDTKLGVVAIGYGDGYPRNAPEGTPVLINGRRVPIVGR
VSMDMLTVDLGLDATDKVGDSALLWGRDLPVEEVAQHIGTIAYELVTKLTPRVAVCLA
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaccctttccccgcgcagaaatcagcagtagcgccctgaaacacaatcttgccaga
ctcagacaattggccccggacagccgggtcatggccgtggtcaaggccaatggctatggc
cacgggctgctcaacgtggcccagtgcgtcgccgatgccgatggcttcggcctggcacgc
ctggaggaggccctggaactgagagccggcaaggtcaaggccaagctgttgctgcttgag
gggtttttccgccaggaagacctgcccttactgatagaacacgacatagaaaccgtggtg
caccacgagtcccagctacagatgctggaatcctgcaccctgagccgccccgtaaccgtc
tggctcaagctggattccggcatgcacaggttgggggttacgccggagcggtttcacgag
ctgtatcaaaggttgctggcctgccccaatgtggccaagccaatccatttaatgactcat
tttgcctgctcggatgaaccggacaacgactttaccgccaggcaaatcaaggtattcaac
gacctgacccgggatctgcccggagagcgaaccctggccaattccgccggcgccctctac
tggcccgaaagtcagggagactggatccgcacgggtattgctttgtacggtgtatcccct
gtctgcggcgatcttggcagcaaccatggccttattcccgccatggagctggtatcccaa
ttgattgcggtacgtgatcacagcgccggtgaacccgtcggctatggcgcggcctggaca
gcccccaaggacaccaagctgggtgtggtggccataggctatggcgacggctatccgcgc
aatgcgcccgaaggtaccccggtacttatcaatggtcgtcgggtgcccatagtgggccgg
gtgtccatggatatgctgacggtggatttggggttggatgccacggacaaagtgggagac
tcagccttgctgtggggccgggacttaccggtggaagaagtggcccagcacataggcact
atcgcctatgaactggtgaccaaattaaccccgagggtagctgtctgcctcgcctga
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