Shewanella sedimentimangrovi: JYB85_15830
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Entry
JYB85_15830 CDS
T07846
Name
(GenBank) 2-oxoacid:acceptor oxidoreductase subunit alpha
KO
K00174
2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit alpha [EC:
1.2.7.3
1.2.7.11
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem00010
Glycolysis / Gluconeogenesis
ssem00020
Citrate cycle (TCA cycle)
ssem00620
Pyruvate metabolism
ssem00650
Butanoate metabolism
ssem00720
Other carbon fixation pathways
ssem01100
Metabolic pathways
ssem01110
Biosynthesis of secondary metabolites
ssem01120
Microbial metabolism in diverse environments
ssem01200
Carbon metabolism
ssem01210
2-Oxocarboxylic acid metabolism
Module
ssem_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ssem_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
JYB85_15830
00020 Citrate cycle (TCA cycle)
JYB85_15830
00620 Pyruvate metabolism
JYB85_15830
00650 Butanoate metabolism
JYB85_15830
09102 Energy metabolism
00720 Other carbon fixation pathways
JYB85_15830
Enzymes [BR:
ssem01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.3 2-oxoglutarate synthase
JYB85_15830
1.2.7.11 2-oxoacid oxidoreductase (ferredoxin)
JYB85_15830
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Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
PFOR_II
Hs1pro-1_N
Motif
Other DBs
NCBI-ProteinID:
QSX36726
LinkDB
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Position
complement(3542750..3544576)
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AA seq
608 aa
AA seq
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MNQKINDFVVRFANTNGTGSASANNMFAKAIFRMGIPVSAKNIFPSNIQGMPTWYEVRVS
DKGYLGRRGGRADLLVAMNAQSLTADIQSVESGGYLLYDSSKPLDEAVLRDDIHMLGMPI
SMICVKEYSDPRQRQLFKNVIYIGALAALLEIEFQVLKDLISDQFKGKEKLITPNIHALE
IGFQFATSHFDCPLPFRVERREYNRGKIMMDGNTATALGALYGGATVVGWYPITPSTSVV
EKFAAYCQRLRIDPASGNNNFAIVQAEDELAAMGMVLGATWNGARAFTATSGPGVSLMTE
FLGLGYFAELPAVLINVQRAGPSTGMPTRTQQADLLACAYASHGDTKHVLLFPADPEECF
SLTAQAFDIADQLQTPVILMSDLEIGMNDHLCCELEWQDDYQYQRGKVLSAAELDELERY
GRYLDVDGDGICYRVLPGEHPQKGAFFTRGTSRDRFAVYTEKGDEYVQNMTRLAEKFRTA
VRYLPRPECREGDKSAAIGLIYYGSTTAAIEEAQDLLRDQGLSSDCLRIRAFPFHSEVQD
FIERHQQVFVIEQNRDGQMRTLLTMELEQDPQQLQSVLHFDGLPISGRFIAAEIVARMAR
DAQTQEAG
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagaaaatcaatgatttcgttgtgaggttcgccaacaccaacggcacggggtcc
gccagcgccaacaacatgtttgccaaggcgattttccgcatgggcatacccgtcagcgcc
aagaacatcttcccctccaacatccagggcatgcccacctggtacgaggtcagggtcagc
gacaagggctacctcggccgtcgcggtggccgcgccgatctgctggtggccatgaatgcc
cagagtctgacggcggatatccagagcgtcgagagtggcggctacctgctgtacgactcc
tccaaacccctggacgaggccgtgctgcgggacgacatccatatgctggggatgccgatt
tcgatgatctgcgtgaaggagtacagcgatccgcgtcagcgacagctgtttaaaaacgtc
atctacataggcgccctggcggcgctgctggagatagagtttcaggtgctcaaggatctg
atttccgatcagttcaagggcaaggaaaagctcatcacccccaatattcacgccctggag
atcggcttccagttcgccaccagtcattttgactgtccgctgccgtttcgggtggagcgg
cgggaatacaaccgcggcaagataatgatggacggcaacacggccacggccctgggggcc
ctgtacggcggcgccacagtagtgggctggtatcccatcaccccctccacctctgtggtg
gagaagttcgccgcctactgccaaaggctgcggatcgatcccgccagcggcaacaataac
tttgccatagtccaggccgaggacgagctggcggccatgggcatggtgctgggggccacc
tggaacggcgcccgggcctttaccgccaccagcggtcccggggtgtcgctgatgaccgaa
tttttggggctgggctattttgccgagctgccggctgtgcttatcaatgtgcagcgggcc
ggtccctcaaccggcatgccgacccgcacccagcaggcggatctgctggcctgcgcctat
gcctcccacggcgacaccaagcatgtgctgctgtttcccgccgatcccgaggagtgtttc
agccttacggcccaggcgtttgatattgccgatcagctgcagaccccggtgatcctgatg
agcgatctggagatcggcatgaacgatcatctgtgctgcgagctggaatggcaggatgac
taccagtatcagcgtggcaaggtgctgagtgccgccgagctcgacgagctggagcgctac
ggccgttacctcgatgtggacggtgacggcatctgctaccgggtattgccgggggagcat
ccccagaagggcgccttctttacccgaggcacctccagggatcgctttgctgtctacaca
gagaagggcgatgagtatgtacagaacatgacccggctggcggagaaattccgcaccgcg
gtgcgttacctgcccagacccgaatgccgcgagggtgacaagagcgccgccattggcctc
atctattacggcagcaccactgcggccatagaggaggcccaggatctgctgcgggatcag
ggactgagttccgattgcctgcggatccgcgcctttcccttccatagcgaggtgcaagac
tttatcgagcgccatcagcaggtgtttgtgatagagcaaaaccgcgacggccagatgcgc
accctgctgaccatggagctggagcaggatccgcagcagctgcaaagcgtgctccacttc
gatggcttgcccatcagcggccgttttattgccgccgagatagtggccagaatggcccgt
gacgcccaaacccaggaggcaggctga
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