Shewanella sedimentimangrovi: JYB85_16000
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Entry
JYB85_16000 CDS
T07846
Name
(GenBank) mechanosensitive ion channel
KO
K03442
small conductance mechanosensitive channel
Organism
ssem
Shewanella sedimentimangrovi
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssem02000
]
JYB85_16000
Transporters [BR:
ssem02000
]
Other transporters
Pores ion channels [TC:
1
]
JYB85_16000
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
MS_channel_1st_1
Motif
Other DBs
NCBI-ProteinID:
QSX36760
LinkDB
All DBs
Position
3589427..3591025
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AA seq
532 aa
AA seq
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MKRILSSLFLLGLSLGALADTADSQHQLQLLQSGIETELQELKQAKGELLAIGEYRISTK
TQALFTQLAREMEQGAEEKLWLLPLIRQQLVLAKRSQDYLDSQIKQLGQNLGKEQGAQAL
LAIARRESQRDELLQREWQLLGWGKQLGMDTSSQVAELGQRLSDRGDRLDSLLKYTQDAL
QQATAEARAAGKDVSAEQTARLAELRQRLAENSASLNATVALIDELGMDSAELKKTLFSV
SGDITQDVLNLDVASGLARQWFGNAESQLLENGPRLMFKLFIFVLILAIASLAGKLVKQA
VRRTVSNSKLNFSRLLQDFFTSLSSKAVFTLGLLIALSQLGFELGPLLAGFGIAGVIIGF
ALQDTLSNFASGMMILIYRPYDVGDLITAAGVTGRVSHMSLVSTTVKTLDNQRLIIPNNK
IWGDTINNITAERHRRIDMTFGISYSDNIEHAETILSDIVQHHPKVLDTPEPKVRLHLLG
ESSVDFVVRPWVKPDDYWEVYWDITKAVKMRFDAEGITIPFPQRDVHFYRNK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcattttgtcctctttattcctgcttggcctgagccttggcgccttggccgac
acagcggatagccaacatcaattgcagcttctgcaaagcggcatagaaaccgaactgcag
gagctgaaacaggccaaaggtgagttgctggccataggcgaataccggatatccaccaag
acccaggcgctgtttacccaactggccagggagatggaacagggtgccgaagaaaagctc
tggctgttgccccttatccgtcaacagctggtattggccaagcgcagccaggattatttg
gacagccaaataaaacaactgggacaaaacctgggaaaggaacagggggctcaggccttg
ctggctatcgcccggcgtgaaagccaacgggatgaactgctgcagcgtgagtggcagctg
ctgggctggggcaaacagttgggcatggacacctcatctcaagtggcggagctgggacaa
aggctcagcgatcgcggcgaccgcttggacagcctgctgaaatacactcaggacgccctg
cagcaagccacggcggaagcccgggccgccggcaaggatgtcagcgccgaacaaacggcc
agactggcagaattgcgccagcgtctggccgaaaacagcgccagcctcaatgccactgtg
gccctgattgatgagttgggcatggacagtgcggagctgaagaagaccctgttcagtgtc
tccggcgacatcacccaggacgtgctcaatctcgacgtggcctcgggactggcccggcaa
tggtttggcaatgccgaatcccaactgctggaaaacggccccaggctgatgttcaagctg
tttatcttcgtgcttatcctggccattgccagcctcgccggcaagctggtgaaacaggcg
gtgcgccgcaccgtcagtaattccaagctcaacttcagccgcctgttgcaggacttcttt
acctccctgtcgtccaaggcggtatttaccctgggtctgctgatcgccctgtcgcagctg
ggtttcgaactgggccccttgctggcgggtttcgggatcgccggtgtcatcataggtttt
gcactgcaggacaccctgtccaacttcgcctcggggatgatgatcctgatttaccgtccc
tatgacgtgggcgatctcatcacagccgccggtgtcacggggcgggtcagccatatgagc
ctggtgtccaccacggtcaaaaccctcgacaaccagcgacttatcatccccaataacaag
atctggggcgacaccatcaacaacatcaccgccgagcgccatcgccgcatcgacatgacc
tttggtatcagctacagcgacaacatagaacacgccgaaaccatactcagcgacatagtg
cagcaccatcccaaggtgctggacacccctgagcccaaggtgcggctgcatctgttgggt
gaatcttctgtggatttcgtggtgcggccatgggtaaaaccggacgattactgggaggtc
tactgggacattaccaaggcggtgaagatgcgcttcgacgccgagggcattaccatcccc
ttcccccagcgcgatgtgcatttttacagaaataaatag
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