KEGG   Shewanella sedimentimangrovi: JYB85_16075
Entry
JYB85_16075       CDS       T07846                                 
Symbol
rimK
Name
(GenBank) 30S ribosomal protein S6--L-glutamate ligase
  KO
K05844  ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
ssem  Shewanella sedimentimangrovi
Brite
KEGG Orthology (KO) [BR:ssem00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ssem03009]
    JYB85_16075 (rimK)
Ribosome biogenesis [BR:ssem03009]
 Prokaryotic type
  ribosomal protein modification factors
   JYB85_16075 (rimK)
SSDB
Motif
Pfam: RimK Rimk_N GSH-S_ATP ATPgrasp_ST ATP-grasp_3 Dala_Dala_lig_C R2K_3
Other DBs
NCBI-ProteinID: QSX36775
LinkDB
Position
complement(3603703..3604608)
AA seq 301 aa
MKIGVLSQFPELYSTRRLLEACHNRGHEALVINPINCYMNINSIKPSIHLEGQEVLGLDA
IIPRIHASVTFYGCAVVRQFEMMGVFAANDSISIARSRDKLRALQLLSRKGIGMPVTGFA
NKPDDIPDLINMVGGTPLVIKLLEGTQGIGVVLAETRKAAESVIEAFLGLKANIMVQEFI
KEANGSDIRCFVVGDKVVAAMQRTGPEGDFRSNLHLGGSAQKVKITPLERKTAVAAVKAM
GLCVAGVDILRSSRGPLVLEVNSAPGIEGIEQTTGIQVAEPIVEYIEKMLAARKGGRSYV
A
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaaaataggcgtgctgtcgcagttccccgagttgtattccacccgtcgcttgctggaa
gcctgccacaaccggggccacgaggccctggtgatcaatcccatcaactgttacatgaac
atcaattcaatcaagcccagcattcacctggaaggccaggaagtgctggggttggatgcc
attattcccagaattcatgccagtgtgaccttctatggctgcgccgtggtgcgtcagttt
gagatgatgggggtctttgccgccaatgattccatctccatcgcccgctcccgcgacaaa
ctcagggcgctgcagctgctgtcgcgcaagggcataggtatgccggtgaccggttttgcc
aacaagcccgatgatattcccgacttgatcaacatggtgggcggtacgccactggtgatt
aaattgctcgaaggcacccagggcattggggtggtgctggccgagacccgcaaggcggcc
gaaagcgtgatcgaggcctttttggggctcaaggccaacattatggtgcaggagtttatc
aaggaggccaatggcagcgatatccgctgttttgtggtcggcgataaggtggtggcggcc
atgcaacgcaccggccccgagggagattttcgctccaacctgcatctgggcggcagtgcc
cagaaagtgaagatcacgccactggagcgcaaaacagcggtggccgcggtgaaagccatg
ggcctgtgtgtggctggggtggatatactgcgttccagtcgcggtcctctggtgctggag
gtcaattctgcgccgggtattgagggcatagaacaaaccacgggtattcaggtggccgag
cccatagttgaatacattgaaaaaatgttggccgcccgtaaaggcggccgaagttatgtt
gcctaa

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