Shewanella sedimentimangrovi: JYB85_16160
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Entry
JYB85_16160 CDS
T07846
Symbol
tcdA
Name
(GenBank) tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
ssem
Shewanella sedimentimangrovi
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ssem03016
]
JYB85_16160 (tcdA)
Transfer RNA biogenesis [BR:
ssem03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
JYB85_16160 (tcdA)
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GFIT
Motif
Pfam:
ThiF
NAD_binding_7
DAO
Sacchrp_dh_NADP
Pyr_redox_2
3HCDH_N
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
QSX39160
UniProt:
A0ABX7R7N6
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All DBs
Position
complement(3623068..3623892)
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AA seq
274 aa
AA seq
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MSVVTHLLSEAYLNRFAGIGRLYGQKALLSFSRAHVVIVGIGGVGTWVAESLARSGIGNI
SLIDLDDICVTNTNRQIHALAGAIGQSKVAVMAERIRAINPECRVNEVEDFITPDNLGQH
FGPDAAIDYVVDCIDAVKPKAALIAWCKRNKLPIVTVGGAGGQLDPQKIQVSDLSRTIQD
PLLAKVRGILRKDYNFSRNLDRKFAIEAVFSTEALTYPGSDGEACATKADAAPGSMRMDC
SSGFGAVTMVTGTFGFMAASRVLYKLQQKAQAQG
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atctctgttgtgactcacctcttatccgaagcctatctgaaccgtttcgccggcataggc
agactctatggccaaaaggcactgctgagtttcagccgcgcccatgtggtcatagtgggg
atcggaggagttggaacctgggtggccgagtctttggcccgcagtggtataggcaatatc
agcctgattgatcttgacgatatctgtgtcaccaataccaacaggcagatccacgcgctc
gccggtgccataggccagtccaaggtggccgtgatggccgagcgaattcgcgccatcaat
cccgaatgccgggtcaacgaggtagaagacttcattaccccggataatctggggcaacat
tttggtccggatgcagccatagactatgtggttgattgcattgacgcagttaaacccaaa
gccgccctcattgcctggtgcaagcgcaataagttgccgatagtgacggttggcggcgcc
ggtggtcagctcgatccccagaaaatccaggttagcgatttgtcgcgcaccatacaggat
cccttgctggccaaggttcgcggtattctgcgcaaggactacaacttcagccgtaatctg
gatcggaaatttgccatcgaggcggtgttctccaccgaggcgctgacctatcccggcagc
gacggggaggcctgtgccaccaaggccgatgcggcccccggcagtatgcgcatggattgc
tcctccgggtttggtgccgtgaccatggtaacgggcaccttcggttttatggccgccagc
cgggtcctctataagttgcaacaaaaggcgcaggcccagggctga
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