Shewanella sedimentimangrovi: JYB85_16615
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Entry
JYB85_16615 CDS
T07846
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
ssem
Shewanella sedimentimangrovi
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssem02000
]
JYB85_16615
Transporters [BR:
ssem02000
]
Other transporters
Pores ion channels [TC:
1
]
JYB85_16615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
QSX36868
UniProt:
A0ABX7R199
LinkDB
All DBs
Position
3719251..3721272
Genome browser
AA seq
673 aa
AA seq
DB search
MRFSLSPLSLGILPLLCAAAQAQTMDEVLEVRGQRPLNSLSSSPKDKVQADLGALLRDMA
GAGLNSNGPLSGIAQYRGLFGDRVHQDIDGHSHAGAGPNAMDTPLSYGSGILTEALELER
GIADIARGTDTLGGSLHLVESQARANEYSAGLRGQYQANGAQSRLGAKANLGSEQQALLL
FADRQQGHTVPQSGAGHRLLPGIYQQTQFGAKYRLFLNDEDYLGLDARHLETDNSATPAL
PMDIDYIRSDRVHTDGSHALGDARLKWQLGYGNGRHGMDNDSLRLRMPTMAARYNQADTE
DWQASIKLSDGDWQFGLDISQARHNSVISDPNNPMLRVDNFNDVRDDSYSLFGQWQSLLA
DWQWQLGARVKHYRFDADAVNHSMAAMKPAIKTLMDRFNQADRSGSDTGLDLVLQGRRAL
SEDLAAVVGLARKQANASYQQRFLWVPMQSTGGLADGRTYVGTLDLRLETAWQLELGLDL
QQQQWLLSPRLFVQRIDNYIQGLPTADPALLMAGDAHTLVFSNTDALLYGMDLQGELRLT
EHWQLMLAAAYIHGERRDEDGDLYRIAAPNANLGLVYNSGNWFAGIHGRAVAAQDKVSAV
QLEQATPGYFTLDIKAGWQGNNWRVSAGVDNLFDLEYADHLGGYNRVAGGDVPVGERLPQ
PGLNAWLMADYRL
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttttcactctctccgctttccctgggtatcttgcccctcttgtgtgccgcggct
caggcacaaaccatggacgaagtgctggaggtacgcggccaaaggccattgaacagcctc
agcagcagccccaaggacaaggttcaggccgatctcggcgccctgctcagggacatggcc
ggcgccggtctcaacagtaacggccccctgtccggcattgcccaatatcgcggcctgttc
ggtgaccgggttcaccaggacatagatggtcatagccacgcgggcgcgggtcccaatgcc
atggatacccccttgagctatggcagcggcatactgaccgaagcgctggaactggaacgg
ggcattgccgacatagctcgcggcacagataccctgggtggcagcctgcacctggttgag
tcccaggctagggcgaacgagtattcggccggcttgcggggccagtatcaggccaatggc
gctcaaagccgccttggcgccaaggccaatctgggctcagagcagcaggcactgctactg
tttgccgaccggcaacaagggcatacggtcccccaaagcggcgcgggccacagattgctg
ccgggcatttatcagcagacccagttcggcgccaagtaccgcctgttcctgaacgatgag
gattatcttggactggatgcccgccatctggaaaccgacaacagcgccaccccggccctg
cccatggacatagactatatccgcagtgaccgtgtccacaccgacggcagtcacgccctg
ggtgatgcacgcctcaagtggcagctgggctatggcaacggccgccacggtatggataac
gacagcctgaggctgcgaatgccaaccatggccgcccgctataaccaggccgacaccgag
gactggcaggcaagcattaagctgagcgacggcgattggcagtttggtttggatatcagc
caggccaggcacaattcggtcattagcgatcccaacaatcccatgttaagggtggataac
tttaacgacgtcagggatgacagctacagtctgtttggccagtggcagagcctacttgcc
gactggcaatggcagctgggggccagggtcaagcactaccgtttcgatgccgacgcggtc
aaccactccatggccgccatgaagcccgccatcaagaccctgatggacagatttaaccag
gccgaccgcagcggcagcgataccgggctggatctggtgctgcagggccgccgcgccctt
tcagaagatctggcggccgtagtgggtctggcccgcaaacaggccaatgccagttaccaa
cagcgcttcctgtgggtgcctatgcagtccaccggcggtttggcggacggacgcacctat
gtgggcacactggatttgcggctggaaaccgcctggcaattggagctggggctggatctg
cagcagcaacaatggctcttgagcccacggctgtttgtgcagcgcatcgataactatatc
cagggcctgccgacggcagatccggcgctgctgatggccggtgatgcccataccctggtg
ttcagcaataccgatgccctgctctacggcatggatcttcagggcgagctgaggctgacc
gaacactggcagctcatgcttgcggccgcctatattcacggcgagcgccgggacgaggac
ggggatctgtaccgcatagcagcacccaatgccaatctgggcctggtctataacagcggg
aattggtttgccggcattcacggccgggcggtggcggcccaggacaaggtgtccgccgtg
cagctggaacaggcgactccggggtatttcaccctcgacatcaaggccggctggcagggc
aacaactggcgcgtgagtgccggtgtggacaacctgtttgaccttgaatatgccgatcat
ctcggtggctataaccgggttgccggtggcgatgtgcccgtgggtgagcgcctgccacaa
ccgggtctcaatgcctggctgatggcggactatcgcctgtaa
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