Shewanella sedimentimangrovi: JYB85_16820
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Entry
JYB85_16820 CDS
T07846
Symbol
acnB
Name
(GenBank) bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase
KO
K01682
aconitate hydratase 2 / 2-methylisocitrate dehydratase [EC:
4.2.1.3
4.2.1.99
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem00020
Citrate cycle (TCA cycle)
ssem00630
Glyoxylate and dicarboxylate metabolism
ssem00640
Propanoate metabolism
ssem00720
Other carbon fixation pathways
ssem01100
Metabolic pathways
ssem01110
Biosynthesis of secondary metabolites
ssem01120
Microbial metabolism in diverse environments
ssem01200
Carbon metabolism
ssem01210
2-Oxocarboxylic acid metabolism
ssem01230
Biosynthesis of amino acids
Module
ssem_M00009
Citrate cycle (TCA cycle, Krebs cycle)
ssem_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
ssem_M00012
Glyoxylate cycle
ssem_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
JYB85_16820 (acnB)
00630 Glyoxylate and dicarboxylate metabolism
JYB85_16820 (acnB)
00640 Propanoate metabolism
JYB85_16820 (acnB)
09102 Energy metabolism
00720 Other carbon fixation pathways
JYB85_16820 (acnB)
Enzymes [BR:
ssem01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.3 aconitate hydratase
JYB85_16820 (acnB)
4.2.1.99 2-methylisocitrate dehydratase
JYB85_16820 (acnB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aconitase_2_N
Aconitase_B_N
Aconitase
HNH_repeat
Motif
Other DBs
NCBI-ProteinID:
QSX36905
LinkDB
All DBs
Position
complement(3757544..3760141)
Genome browser
AA seq
865 aa
AA seq
DB search
MLEAYRKHVEERAAEGVVPKPLDAHQVAELVELVKNPPAGEEAFILDLLENRIPPGVDEA
AYVKAGFLDAVAKGDAKSPILSAERAVELLGTMQGGYNIEPLIHQLDNDKLAPLAAKALS
HTLLMFDSFHDVVEKMNAGNAFAKQVVESWANAEWFLSRPKLADKISLTVFKVTGETNTD
DLSPAPDAWSRPDIPLHALAMLKNARDGIEPDQPGVIGPVKKLEELKTKGFPLVYVGDVV
GTGSSRKSATNSVLWFMGDDIPNVPNKRAGGFCLGGKIAPIFFNTMEDAGALPIELDVSK
MDMGDVIDIFPYQGVVKRHGSDEVISEFELKTDVLLDEVRAGGRIPLIIGRGLTDKAREV
LGLDASAEFVRPQDVADTGKGYTLAQKMVGKACGVAGVRPGQYCEPKMTSVGSQDTTGPM
TRDELKDLACLGFSADLTMQSFCHTAAYPKPVDVNTHHTLPDFIMNRGGISLRPGDGVIH
SWLNRMLLPDTVGTGGDSHTRFPIGISFPAGSGLVAFAAATGVMPLDMPESVLVRFKGKM
QPGITLRDLVHAIPHKAIELGLLTVEKKGKKNIFSGRILEIEGLEHLKVEQAFELSDASA
ERSAAGCTIKLDKDPIIEYLNSNIVMLKWMIAEGYGDRRTIERRIKGMEEWLKNPELMEA
DKDAEYAAVIEIDLDAIKEPILCAPNDPDDAVLLSSVANTKIDEVFVGSCMTNIGHFRAT
GKMLDKFAKTLPTRLWIAPPTKMDKDQLTEEGYYGIFGRVGARIEIPGCSLCMGNQARVA
DGSTVVSTSTRNFPNRLGTGANVYLASAELAAVAALLGRLPTAEEYQVYAKELDATAADT
YRYLNFDQIDSYTDKASKVIFQSAV
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
gtgctagaagcataccgtaaacacgtcgaagaacgtgctgcagagggcgtagtccctaag
ccactcgatgcccatcaagtggccgaactggttgaattagtcaagaatcccccagcaggc
gaagaagcctttatcctggatctgctggaaaaccgtattcccccaggtgtggatgaagcc
gcctatgttaaggccggtttcctggacgccgtagccaagggcgacgccaagtctccaatc
ctgagtgccgagcgtgccgttgagctgctgggcaccatgcagggtggttacaacattgag
ccgctgatccatcaactggacaacgacaagttggcccctctggccgccaaggccctgtca
cacaccctgctgatgttcgattctttccacgacgtggttgagaagatgaacgccggcaac
gcctttgccaagcaagtggttgagtcctgggccaacgccgagtggttcctgagccgtcct
aaactggcggacaagatctccctgaccgtgttcaaggtgaccggtgaaaccaacaccgac
gatctgtctcctgctcccgatgcctggtctcgtcccgatatcccgctgcatgccctggcg
atgctgaaaaacgcccgtgacggcattgagcccgatcaaccaggcgtgattggtccggtc
aagaagctggaagagctgaagaccaaaggcttcccactggtatacgtgggtgacgtggta
ggtacaggttcatcccgtaagtctgccaccaactctgtgctgtggttcatgggcgatgat
atccccaacgtacccaacaagcgtgccggtggtttctgtctgggtggcaagattgcccca
attttcttcaacaccatggaagatgccggcgccctgccaatcgagctggacgtgagcaag
atggacatgggtgacgtgatcgatatcttcccataccaaggtgtggtgaagcgtcacggc
agcgatgaagtgatctccgaatttgaactcaagaccgacgtgctgctcgacgaagtccgc
gccggtggtcgtattccgctgatcattggtcgtggtctgaccgacaaggcccgtgaagtg
ctgggtctggacgcgtccgctgaattcgtacgtccacaggacgtggccgacaccggcaag
ggttacaccctggcccagaagatggttggtaaggcttgcggcgtagccggcgtgcgtccc
ggtcagtactgcgagcccaagatgacctctgtgggttcccaggacaccacaggcccaatg
acccgtgatgagctgaaagatctggcctgtctgggcttcagtgccgacctgaccatgcag
tctttctgtcacactgccgcttatccaaagccagtggacgtgaacactcaccacaccctg
cctgacttcatcatgaaccgcggtggtatttccctgcgtccaggtgacggtgttatccac
tcttggctgaaccgtatgctgctgccggatacagtgggtacaggtggtgactctcacacc
cgtttcccaatcggtatctctttcccagccggttccggtctggtggccttcgctgcggcc
acaggtgtgatgccactggatatgcctgagtcggtgctggtgcgcttcaagggcaagatg
caacccggtatcaccctgcgcgatctggtacatgccatcccgcacaaggccatcgaattg
ggtctgctgaccgttgagaagaagggcaagaagaacatcttctccggccgtattctcgaa
atcgaaggtctggagcacctgaaggtagagcaggcattcgaactgtctgatgcctctgcc
gagcgctctgctgccggttgtaccatcaagctggataaagatcctatcatcgagtatctg
aactccaacattgtcatgctcaagtggatgattgccgaaggttacggtgatcgccgtacc
atagagcgccgcatcaagggcatggaagagtggctgaagaatcctgagctgatggaagcc
gataaggatgccgagtacgccgcggttatcgaaatcgatctggatgccatcaaggagcct
atcctgtgtgcccctaacgatccggacgatgccgtgttgctgtccagcgtggccaacacc
aagatcgatgaagtgttcgtcggctcctgtatgaccaacattggtcacttccgcgcaacc
ggtaagatgctggacaagtttgccaagactctgcctacccgtctgtggattgcgccgcca
accaagatggacaaggatcagctgaccgaagaaggttactacggtatcttcggccgtgtc
ggtgcccgcatcgaaatcccgggttgttctctgtgtatgggtaaccaggctcgcgtggcc
gacggttcaaccgtggtttctacctctacccgtaacttcccgaaccgtctgggtacaggt
gccaacgtgtatctggcctctgcggaactggccgccgtggctgccctgctgggtcgtctg
ccaactgccgaggaatatcaggtatacgccaaggaactcgacgccacagccgccgatacc
taccgttacctgaacttcgatcagattgactcctacacagacaaggcgtccaaggtgatc
ttccagtctgcggtctaa
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