Shewanella sedimentimangrovi: JYB85_16870
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Entry
JYB85_16870 CDS
T07846
Symbol
ampD
Name
(GenBank) 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD
KO
K03806
N-acetyl-anhydromuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
ssem
Shewanella sedimentimangrovi
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ssem01011
]
JYB85_16870 (ampD)
Enzymes [BR:
ssem01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
JYB85_16870 (ampD)
Peptidoglycan biosynthesis and degradation proteins [BR:
ssem01011
]
Peptidoglycan biosynthesis and degradation
Amidase
JYB85_16870 (ampD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase_2
Motif
Other DBs
NCBI-ProteinID:
QSX36914
LinkDB
All DBs
Position
complement(3778448..3779002)
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AA seq
184 aa
AA seq
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MANNEWRQGWFLAAQRCESPFFNTRPNGEVSLLVIHNISLPAGCFGTPYIEDLFLGKLDC
AADPSFADLKGLEVSAHFLIRRDGAVLQFVSCDQRAWHAGLSSFEGRSGCNDFSIGIELE
GTDEVDFEPVQYERLTELTSKLMRHYPGISRDRIVGHSDIAPGRKTDPGPHFDWRSYLAS
LAEL
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
gtggccaataatgaatggcggcaaggttggttcctggctgcccaaagatgtgagtctccc
ttctttaatacccggcccaatggggaagtcagcctgttggtcattcataatatcagtctg
cccgccggctgctttgggacaccttatatagaagacttgtttctgggaaaattggactgt
gctgccgaccccagtttcgccgatcttaagggcctggaagtctcggcgcattttcttatt
cgacgtgatggtgcggtattgcagtttgtatcctgtgatcagcgcgcctggcatgcgggc
ctttccagttttgaaggccgtagcggctgcaatgacttttccatcggcatagagctggag
ggtacggatgaggttgattttgaaccggtgcaatatgaaaggctcactgagctgaccagc
aagctgatgcggcattatcccggcatcagcagagatcgtatcgttggccacagcgatatt
gcgccaggaagaaaaaccgatccgggtccacactttgattggcgctcttacctggccagt
ctggcggaactttag
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