Shewanella sedimentimangrovi: JYB85_16890
Help
Entry
JYB85_16890 CDS
T07846
Name
(GenBank) type II secretion system F family protein
KO
K02653
type IV pilus assembly protein PilC
Organism
ssem
Shewanella sedimentimangrovi
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
ssem02044
]
JYB85_16890
02035 Bacterial motility proteins [BR:
ssem02035
]
JYB85_16890
Secretion system [BR:
ssem02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
JYB85_16890
Bacterial motility proteins [BR:
ssem02035
]
Pilus system
Pilus assembly proteins
JYB85_16890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSF
Pho86
Motif
Other DBs
NCBI-ProteinID:
QSX36918
LinkDB
All DBs
Position
3783209..3784477
Genome browser
AA seq
422 aa
AA seq
DB search
MATATASRRAGKGVKAGAKSQPKIFTFTWTGLNKDGKKSSGELRGANVAEIKNILKSQGI
SPKNVKKKSEGIQLFEAKINAMDIAMLTRQIATMLAAGVPLVTTIEMLGRGHEKPKMREL
LGTILNEIQSGIPLSDALRPHRLYFDDLYVDLVGAGEHSGSLDTVFDRIATYREKAEALK
SKIKKALFYPAAVVIVAIAVTVLLLVFVVPQFEEVFKGFGAELPAFTQLVVGISRFLQDY
WYIFLISIVAFVFIFVRLHRNSQAFRDRIDELMLKIPVVGEILHKGAMARFARTLATTFA
AGVPLIDGLESAAGASGNAVYKKALLKIRQEVMAGMQMNVAMRTVNLFPDMLIQMVMIGE
ESGSLDNMLNKVANIYEMQVDDAVDALSSLIEPIMMVVIGTIVGGLIVAMYLPIFNLGKV
VG
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagccactgcatccagaagagccggtaaaggggtaaaagcaggcgccaaaagc
caacccaagatatttaccttcacatggaccggcttaaacaaagacggcaaaaaaagcagc
ggcgaactgcgtggtgctaatgtcgccgaaattaaaaatattctcaagtctcaaggcata
tcacccaagaacgtcaagaaaaagtccgaaggcatacagctgttcgaagccaagatcaat
gccatggacatagctatgcttacccgtcagatagccaccatgctggctgcgggtgtgccc
ttggtcaccaccattgaaatgcttggccgtggccatgaaaagcctaaaatgcgggaattg
ctaggaaccattcttaatgaaatccaatccggtatcccattgtccgatgccttaagacct
cacagactgtatttcgatgacttgtatgtagacttggttggcgccggagagcactcaggc
tcccttgatacggtattcgaccgcattgccacctatcgggaaaaagcggaagcgctgaag
tcaaaaatcaagaaagccctgttttatcccgccgcagtggtgatagttgccatagctgtg
acagttcttctactggtatttgtggtaccgcaatttgaagaggtcttcaaaggctttggt
gctgaattgccggcgtttacccagctggtcgtcggcatatcccgttttttacaggattat
tggtacatatttttaatttccattgttgcctttgtattcatatttgtgcgcctgcatcgt
aattcgcaggcgttccgggacagaattgacgaattgatgttaaaaatccctgttgtgggt
gaaattttacacaagggcgccatggcccgttttgcccgcaccctggccaccacctttgcc
gccggtgtgcctctgatcgatggtcttgagtcagcagctggcgcttccggtaatgccgtc
tataaaaaagcgctgctcaaaatccgccaggaagtcatggccggtatgcaaatgaacgtg
gccatgcgcacggtcaacttatttcccgacatgctaattcagatggtgatgatcggagaa
gaatccggctcattggataacatgttgaacaaggtcgccaacatctacgagatgcaggtg
gatgatgccgttgatgcgctgtccagtttgattgaacccattatgatggtggtgattggc
accatagtgggcggactcattgtagccatgtatttgcccatatttaacttgggtaaagta
gtcggatag
DBGET
integrated database retrieval system
