Shewanella sedimentimangrovi: JYB85_17245
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Entry
JYB85_17245 CDS
T07846
Symbol
prpF
Name
(GenBank) 2-methylaconitate cis-trans isomerase PrpF
KO
K09788
2-methylaconitate isomerase [EC:5.3.3.-]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem00640
Propanoate metabolism
ssem01100
Metabolic pathways
ssem01120
Microbial metabolism in diverse environments
ssem01200
Carbon metabolism
Module
ssem_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
JYB85_17245 (prpF)
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Gene cluster
GFIT
Motif
Pfam:
PrpF
Motif
Other DBs
NCBI-ProteinID:
QSX36983
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All DBs
Position
3874349..3875542
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AA seq
397 aa
AA seq
DB search
MAFKPQIKIPATYMRGGTSKGVFFRLEDLPEAARVPGAARDALLMRVIGSPDPYAKHTDG
MGGATSSTSKCVILNKSNVANHDVDYLYGQVAIDSAFVDWSGNCGNLSTAAGAFAIHAGL
VDPARIPANGICSVRIWQANINKTIIAHVPISNGEVQETGDFELDGVTFPAAEIVLEFID
PADEGEGDGPASMFPTGNLVDSLEVPGVGTLQATMITAGIPTVFVNAADIGYQGTELQEA
INGNPQALAMFEAIRVAGALRMGLIKTVAEAATRQHTPKIAFVAPAKSYTASSGKQIAAE
DVDLLVRALSMGKLHHAMMGTCAVAIGTAAAVPGTLVNLAAGGGEPQAVRFGHPSGTLRV
GAEAKLQDGEWTVTKAIMSRSARILMEGAVRVPGDSF
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggcatttaaaccacagataaaaattcccgccacctatatgcgtggcggcaccagcaag
ggcgtattcttccgcctggaagacctgccagaagctgcccgggtaccgggcgcggcccgc
gatgccctgctgatgcgggtcataggcagccccgatccctatgccaaacacaccgacggc
atgggcggcgccacctccagcaccagcaagtgcgtgatcctgaacaagagcaacgtcgct
aatcacgacgtggactacctctacggccaggtggccatagactcggccttcgtggactgg
agcggcaactgcggcaacctgtccaccgccgccggagccttcgccatccacgccggtctg
gtggatcctgcccgcattcccgccaacggcatctgttcggtgcgcatttggcaggccaac
atcaacaagaccattatcgcccacgtgcccatcagcaatggcgaggtgcaggaaaccggt
gactttgaactggacggcgtgaccttccccgccgccgaaatcgtgctggagtttatcgac
cccgccgacgagggcgaaggtgatggtccggcctccatgttccccacaggtaatctggtg
gacagcctggaagtgccgggtgtcggcaccttgcaggcgaccatgatcaccgccggtatc
ccgaccgtgttcgtcaatgccgccgacataggctaccagggcacggaattgcaggaggcc
atcaacggcaacccgcaagcgctggcgatgtttgaagccatccgcgtggcgggcgccctg
cgcatgggtttgatcaaaaccgtcgccgaagcagccacccgtcagcacacccccaagatt
gcctttgtggcaccggccaagtcctacacggcctcaagtggtaagcagattgcggccgag
gatgtcgacctgctggtgcgggccctgtccatgggcaagttgcaccacgccatgatgggc
acctgcgccgtggccataggcacggccgcggccgtccccggcaccctggtcaacctggcc
gccggtggcggcgagccccaggcggtgcgtttcggtcatccctccggcaccctgcgtgtc
ggcgccgaagccaaactgcaggatggcgagtggactgtgaccaaggccatcatgagccgc
tcggcgcggatcctgatggaaggcgcggtccgggttcccggcgacagcttctga
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