Shewanella sedimentimangrovi: JYB85_17325
Help
Entry
JYB85_17325 CDS
T07846
Name
(GenBank) sodium:proton antiporter
KO
K18218
tetracycline resistance efflux pump
Organism
ssem
Shewanella sedimentimangrovi
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ssem02000
]
JYB85_17325
01504 Antimicrobial resistance genes [BR:
ssem01504
]
JYB85_17325
Transporters [BR:
ssem02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
JYB85_17325
Antimicrobial resistance genes [BR:
ssem01504
]
Gene variants
Tetracycline resistance genes
Transporters
JYB85_17325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_H_antiporter
Motif
Other DBs
NCBI-ProteinID:
QSX36997
LinkDB
All DBs
Position
complement(3892418..3893887)
Genome browser
AA seq
489 aa
AA seq
DB search
MDISATHLLPLLLTLILALVLRRTLLALGIGVLASAAMLSDYAPLATLAYLGDSLSGQFY
LDGWQSWHLNVLAAMMLLGVMTELLARGGAVAAFGHWLERRIRDGRSARLGIMLLGWLVF
IDGIFSCLAVGHISRPIAERYGLPKGQAAYLVDASASPLCSLVPFSSWGPYVMALLAAIS
FLPLPPLAAFIEIARHNLYAICTLVLLALVAWGNWGWPEAQAWPTEGELRRGSPWQLLLP
LLTLLTAAVILTLYSGAQQGGELAQWLANADIGTAMRDAALLACLVALLLSAVGGRKVGQ
LLGDLLHGLRNISLAIAILLLTWMTGKAIADLGVAKLLAETAELWLSPRFLLPGIFMLCA
LMAFATGTSWGTFAIMIPICAEIAHSLAPELLLPALSAVMAGSVFGDHCSPISDTSILSA
TASGCEVQQHVLTQLPFAMMAALASLGGYVLFNLGLGYGWGLLLALGLLPVMLALLRRLT
RPNNRVIGQ
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggacatttccgccacccatttactgcccctgttgctgaccctgatacttgccctggtg
ttgcgccgaaccctgttggccctggggattggtgtgctggccagcgccgccatgctcagt
gattatgcaccgctggccactctggcctatttgggggacagcctgagtgggcaattctac
cttgatggctggcaaagttggcacctgaatgtgttggccgccatgatgctgctgggggtg
atgaccgaattgttggcccgtggcggtgccgtggctgcttttggacattggctggagcgg
cgcattcgcgatggtcgcagcgcccgcttggggatcatgctgctgggctggctggtcttt
atcgacggcattttcagttgcctggcggtgggccacatcagccgccccattgccgaacgt
tacggtctgcccaaggggcaggcggcctacctggtggatgccagtgcctcgcccctgtgt
tcactggtacccttttccagttggggcccctatgtgatggcactgctggcggccatcagt
ttcctgccgctgccgccattggcggcctttatcgagatagcacgccataacctctatgcc
atttgcaccctggtgttgctggcgctggttgcctggggcaattggggttggcccgaggcc
caggcctggccaacggagggggagctgcgccggggcagcccctggcaactgctgttgccc
ttactgactttgctgacggccgccgtcattctgaccctgtattcgggcgctcagcaaggg
ggggagctggcccagtggcttgccaacgccgacataggcacagccatgcgggatgcggcc
ttgctggcatgcctggtggccttgctgctgtctgccgtcgggggccgtaaggtcgggcaa
ttgcttggcgatctgctccatgggctgcgcaatatttccctcgccatcgccatactgctg
ctgacctggatgacgggcaaggcgattgcggatctcggggtggccaagttgctggccgaa
actgccgaactctggttgtcgccccgcttcctgttgccggggatctttatgctgtgtgcc
ttgatggccttcgccaccggcaccagctggggcacctttgccatcatgatccccatctgt
gccgagatagcccactccctggcgccggaattgctgttgccggccctcagcgccgtgatg
gccggctcagtgttcggcgatcattgttcgccgatttccgacaccagtattctcagtgcc
accgccagtggctgcgaagtgcagcagcacgtgctgacccagttgccctttgccatgatg
gcggcattggccagtctggggggctatgttttattcaatctggggctgggctatggctgg
gggctgttgttggccctgggactcttgcctgtcatgctggcactgctgcgccggctgacc
cgcccaaacaatagggtcatcggccaatag
DBGET
integrated database retrieval system
