Shewanella sedimentimangrovi: JYB85_17475
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Entry
JYB85_17475 CDS
T07846
Symbol
rsmI
Name
(GenBank) 16S rRNA (cytidine(1402)-2'-O)-methyltransferase
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
ssem
Shewanella sedimentimangrovi
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ssem03009
]
JYB85_17475 (rsmI)
Enzymes [BR:
ssem01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
JYB85_17475 (rsmI)
Ribosome biogenesis [BR:
ssem03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
JYB85_17475 (rsmI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
Motif
Other DBs
NCBI-ProteinID:
QSX37023
LinkDB
All DBs
Position
complement(3923138..3923980)
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AA seq
280 aa
AA seq
DB search
MSLPCALYIVPTPIGNLGDMSPRAIEVLSGVSLVACEDTRHSGKLLSHFGIATRTTALHD
HNERARAQWIVDKLAAGEAVALISDAGTPLISDPGYHLVSHVRQAGFQVIPLPGPCAAIT
ALSASGLPSDRFSFEGFLPAKEKARLDKLQELKEDPRTLIFYESPHRICYSLEAIVQVFG
AERQLVMAREVSKTFETFLSGTAAEVCAMVAADANQQKGEIVLMCHGHSSVDDEALPAKA
LDTLKLLCEELPLKKAAALAAQIHGLKKNALYKYGLEQNW
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgtcactgccctgcgcgctttatatcgttcccactcccataggtaatctgggggacatg
agcccaagggcaatcgaggtgctcagcggcgtcagtttggtagcctgcgaagacacccgt
cacagtggcaagctgctgagccattttggcattgcgacccgcaccacggcgctgcacgat
cacaatgagcgtgcccgggcccagtggatagtggataagttggccgccggtgaggctgtg
gccctgataagcgatgccggtacgccattgatttccgatcccggctatcacttggtgtcc
catgtgcgtcaggccggattccaggtgatccccctgccgggtccttgcgccgctattacg
gccttgtcggcctcggggctgccatcggaccggttttccttcgaaggctttttgccggcc
aaggaaaaggcgcgcctggataagttgcaggagctgaaggaagatccgcgtacgctgatt
ttttacgagtcaccccacaggatttgttacagcctggaggccatagttcaggtctttggc
gccgagcgccagctggtgatggccagggaagtgagcaagacctttgaaaccttcctctcc
ggcacggctgccgaggtctgcgccatggtggccgccgatgccaaccagcaaaagggcgag
atagtgctgatgtgccatgggcacagcagcgttgatgacgaggcgctgcccgccaaggcg
ctcgatacgttgaagttgctgtgcgaggagttaccgctgaaaaaagctgcggccctggct
gctcaaatccacggcctgaagaagaatgccctctataaatacggtctggaacagaactgg
taa
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