Shewanella sedimentimangrovi: JYB85_17625
Help
Entry
JYB85_17625 CDS
T07846
Name
(GenBank) aromatic amino acid lyase
KO
K01745
histidine ammonia-lyase [EC:
4.3.1.3
]
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem00340
Histidine metabolism
ssem01100
Metabolic pathways
Module
ssem_M00045
Histidine degradation, histidine => N-formiminoglutamate => glutamate
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09100 Metabolism
09105 Amino acid metabolism
00340 Histidine metabolism
JYB85_17625
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
JYB85_17625
Enzymes [BR:
ssem01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.3 histidine ammonia-lyase
JYB85_17625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lyase_aromatic
Motif
Other DBs
NCBI-ProteinID:
QSX37050
LinkDB
All DBs
Position
3951757..3953319
Genome browser
AA seq
520 aa
AA seq
DB search
MNNANPSTPNEEIVHVGRRILSLEQVVAIAEGASVSLCKEADYREYIQKGARFIDSLLHE
EGVVYGVTTGYGDSCTVNVGLDLVHELPLHLSRFHGCGMGEILSVPQARAVMACRLNSLA
IGKSGVSYELLERIETLLNLNVVPAIPEEGSVGASGDLTPLSYLAAILVGERDVIYQGQR
RPAIEVLQQLDLAPLKLRPKEGLALMNGTAVMTALACLAYHRADYLCRLASRITAMASLT
LKGNSNHFDELLFAVKPHPGQNRVASWIREDLNHHEHPRNSDRLQDRYSIRCAPHIIGVL
ADAQPFLRQFIETELNSANDNPIVDGEGEHILHGGHFYGGHIAFAMDAMKNAVANIADLL
DRQMALVMDTKFNNGLPANLSAARGERRPINHGFKAVQIGVSAWTAEALKLTMPASVFSR
STECHNQDKVSMGTIAARDCLRVLQLTEQVGAASLLAMTQGIRLRIIAGELQQDSLTASV
AQTLHQVSADCDLLTEDRPLEALLRNTVAKIQQRQWEVCR
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgaataacgctaacccatcaacaccaaatgaagagattgttcatgttggccgcagaata
ctcagcctggaacaggtcgtcgccatcgccgaaggtgctagcgtaagcctttgtaaagaa
gctgattaccgtgagtacattcaaaagggtgcccgctttatcgacagcctgctgcacgaa
gaaggtgttgtctacggtgttaccactgggtatggcgattcctgtacggtcaatgtcggc
ctggatctggtgcacgagctgccgctgcacctgtcccgcttccatggctgcggcatgggt
gaaatcctcagcgtgccccaggcccgcgccgtcatggcctgccgtctcaactccctggcc
attggcaaatccggcgtcagttatgaattgctggagcgtatagagaccctgctaaacctc
aatgttgtccccgccattccggaagaaggctcagtgggagccagcggcgatctcaccccc
ttatcatacctggcggccatattggtcggtgagcgcgatgtcatctatcaaggccaaagg
cgaccggctatcgaagtattgcagcagttggacctggcaccgctaaaactgcgccccaag
gaaggcctggcactgatgaacggcaccgccgtgatgacggccctggcttgcctggcctac
cacagggcggattacctgtgccgtttggccagccgcattaccgccatggcgtcattaacg
ctcaagggtaactccaaccacttcgatgagttgctgtttgcggtaaaaccccacccgggt
caaaaccgggtggcgagctggatccgcgaagatctcaatcaccacgagcacccccgcaat
tccgaccggctgcaggacagatattccatccgctgtgcgccgcacattatcggggtattg
gccgatgcccagcccttcctgcgccagtttatcgagaccgagctaaacagcgccaacgac
aaccccatagtggatggcgagggtgagcacatactgcacggtggccatttctacggcgga
catatcgcctttgccatggatgccatgaaaaacgccgtggccaacatagccgatctgctc
gaccggcagatggctttggtcatggacaccaagttcaacaatggcctgccggccaatctg
tccgcggcccgaggcgagcgacgtcccatcaaccacggctttaaggcggtgcagattggg
gtctctgcctggaccgccgaggcgctgaaactcaccatgcccgccagcgtgttttcccgc
tcgaccgagtgccataaccaggacaaggtcagcatgggcaccatagcggcgcgtgattgt
ctgcgggtgctgcaattgaccgagcaggttggcgcagcctccttgctggccatgacccag
ggtatccgtttgcggatcatcgccggcgaattgcaacaggattcactcacggcctcagtg
gcccaaaccctgcaccaggtcagtgccgattgtgatctgctgaccgaagacaggccactt
gaagccctgctgcgcaataccgtggcgaaaattcagcagcgccaatgggaggtgtgccga
tga
DBGET
integrated database retrieval system