Shewanella sedimentimangrovi: JYB85_18055
Help
Entry
JYB85_18055 CDS
T07846
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
ssem
Shewanella sedimentimangrovi
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ssem03021
]
JYB85_18055 (rpoH)
Transcription machinery [BR:
ssem03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JYB85_18055 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
2Fe-2S_thioredx
Fe_dep_repress
GntR
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
QSX37125
LinkDB
All DBs
Position
complement(4043898..4044755)
Genome browser
AA seq
285 aa
AA seq
DB search
MTEQTQSMALMVPQGSGSLEAYIHSVNSMPMLEAEEEYALAKRLQATGDLQAAKQLIMSH
LRFVVHVAKGYAGYGLPQADLIQEGNIGLMKAVKRFDPEVGVRLVSFAVHWIKAEIHEYV
LKNWRIVKVATTKAQRKLFFNLRKAKQRLGWFSDEEVTMVAENLGVSKADVTEMESRMAA
QDPAFDLLNDSDDEHDFAPVHYLEDHSSDLASQVENDNWESNSQARLLSAIKTLDERSQH
ILRARWLDDDKITLQELADTYQVSAERIRQLEKNAMNKLKACMEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacaaacgcaatcaatggcactgatggttccccagggaagcggcagccttgaa
gcctacattcattcggtcaacagcatgcccatgctggaggcggaggaagagtacgcgctt
gccaagcgtttacaggcaaccggggacctgcaggcggcgaaacagctgattatgtcgcat
ctgcgctttgtggtgcatgtggccaagggctacgcaggttatggcctgccccaggccgat
cttatccaggaaggcaacataggcctgatgaaggccgtcaagcgcttcgatcccgaagtg
ggcgtgcgcctggtgtcctttgccgtgcactggatcaaagcagaaattcatgaatatgtg
ctgaaaaactggcgcatagttaaagtggccaccaccaaggcccaacgtaaactcttcttc
aatctgcgcaaggccaagcaacgtctgggctggttcagcgatgaggaggtcaccatggtg
gcggagaacctcggggtgtccaaggcggatgtgaccgagatggaatcgcgcatggcggcc
caggatccggccttcgatctgctcaacgacagtgacgatgagcatgattttgccccggtg
cattatctggaagaccattcttccgatctggcttcccaggtggaaaacgacaattgggaa
agcaattcccaggcgcgtctgctgtcggccatcaagaccctcgacgagcgcagccagcac
attctgcgagcccgttggttggacgatgacaagatcaccctgcaggagctggccgatacc
tatcaggtgtccgccgagcgcattcgccagttggaaaagaatgccatgaacaagctcaag
gcctgcatggaagcctga
DBGET
integrated database retrieval system
