Shewanella sedimentimangrovi: JYB85_18210
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Entry
JYB85_18210 CDS
T07846
Name
(GenBank) PAS domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
ssem
Shewanella sedimentimangrovi
Pathway
ssem02020
Two-component system
ssem02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
ssem00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JYB85_18210
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
JYB85_18210
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
ssem02035
]
JYB85_18210
Bacterial motility proteins [BR:
ssem02035
]
Flagellar system
Chemotaxis proteins
MCPs
JYB85_18210
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
PAS_8
HAMP_2
PAS_9
PAS_10
PAS_7
ATG9
DUF746
Motif
Other DBs
NCBI-ProteinID:
QSX37154
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Position
4073876..4076461
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AA seq
861 aa
AA seq
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MDAGIKPLMGNHPLTLAGVFTLTIALLLGLFGQTGSYVVATQALALALLLTGIARQGRWH
TQVREALEAIADALDRDSIGQLDQYEIPGWESFGARFRQWWQAQQQRKATLKALDICQAN
VMLATPEGEIVYFNQSLKKTLTEAEEDIRQVLPDFSVSHLNGANMDDFHRNPAHQRKLIS
SLKSVYATRIKVGSRTFSLIASPVFDEQQQRIATVVEWQDLTESLAKQEEAEKLQRETTR
IKQALDVCQANVMMADENYNITYFNKSLVEMLTSNEKQLQQSISRFEVARLMGANIDIFH
QHPEHQRQLLDKLTSSYQARIKVAGLTFNLIATPVFDNGKRTGTVVEWRDMTQQLQREER
EQRLAEENARIRQALDNVSSNTMVADNDCNIIYLNGAVRNMFKTAQKDINRDLPNFNADR
LIGQNIDLFHKHPAHQRNILGGLSSTYDSQLKVGGRTFRIIANPIHDANGQRIGTVVEWS
DRTAEVAIEHEIDGIIAAASAGDLSQRIATEDKAGFFLNLSKGLNSLVTIADNVISDVAD
VLDGLAKGDLTRKIQGDYQGQFGKLKTDANATVTRLTEVLMGISESANTVTSGAEEIAQG
NTDLSQRTEEQAASLEETASSMEQMTATVKQSAENATLANKLAQEASNKANHGGKVVKQA
VSAMEAINDSSKRIADIISVIDEIAFQTNLLALNAAVEAARAGEQGRGFAVVAGEVRNLA
QRSAGAAKEIKELIRDSVNKVNDGTSLVNQSGSTLQEIVQAVSKVADMISQISIAAEQQA
SGIQEVNKAVAQMDEMTQQNAALVEEVSAAGDAMAEQARNMKRQLGFFRTAEHAAAPLAL
VSGDKRPVASFKASKEEWHEF
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaggaatcaaacccctgatgggcaatcatcccctgacgctggcaggtgtattc
acactgacaattgctttgttactgggcctgttcggccagacgggcagctatgttgtcgcc
acccaggcgctggcgctggccttgttgctgactggcattgcccgccagggccgctggcat
actcaagtccgcgaggctctggaggccatagccgacgccctggacagggacagcataggg
caactggatcagtatgagatccccggctgggaaagcttcggagccagattcaggcaatgg
tggcaggcacagcaacagcgcaaagccacccttaaggccctggatatctgtcaggccaac
gtgatgctggcaaccccggaaggtgaaattgtctacttcaaccagtcactgaaaaagacc
ctcaccgaagccgaagaggacattcgtcaagtgctgccggatttcagcgtctcgcacctc
aacggcgccaacatggatgacttccatcgcaatcctgcccatcagcgcaaattgataagc
tctctgaagagcgtctatgccacccgcatcaaggtcggcagccgcaccttcagcctgata
gcctcccccgtgttcgacgagcagcaacaacgcatcgccactgtggtcgaatggcaggat
ctcaccgaaagcctggccaagcaggaagaggccgaaaaactacaaagggaaactacccgc
atcaaacaggccctggacgtgtgccaggccaatgtgatgatggccgatgaaaattacaac
atcacttacttcaacaagtccctggtggagatgctgaccagcaatgagaagcagctgcag
caatccatcagccgctttgaggttgcccgcctgatgggcgccaacatagatattttccat
caacatcctgagcaccagcgacaactgctggataaactgaccagcagttaccaagccagg
atcaaggtggcggggctcaccttcaacctgatagccacgccggtattcgacaatggcaaa
cgcacggggacagtggttgagtggcgcgatatgacgcaacaactgcaacgggaggagcgg
gagcagcgcctggcggaagaaaatgcccgcatcaggcaagcactggacaatgtgtcgtcc
aataccatggtggccgacaatgactgcaacatcatctatctcaatggtgcggtgcggaac
atgttcaaaaccgcccaaaaagatatcaaccgggatctgcccaatttcaatgccgatagg
ctcataggccagaacatagacctgtttcacaaacatccggcccaccaacgcaacattctc
ggcggcctcagttcgacctacgacagccagctcaaggtgggtggccgcaccttcaggatc
atcgccaaccccattcacgacgccaacggccagcgaattggcactgtggttgaatggtcc
gacagaaccgccgaagtggccatagagcacgagattgacggcataatcgcggccgccagt
gccggcgatctgagccagcgcatcgccaccgaagataaggccggctttttcctcaacctg
tccaagggactcaacagcctggtgaccatagccgacaacgtgatatccgatgtggccgat
gtgctcgacggcctggccaagggggatctgacccgcaagatccagggggactaccagggg
caattcggcaagctgaaaacagacgccaacgccacagtcacccgcctgaccgaagttttg
atggggatcagcgaatcggccaataccgtcacctcgggtgccgaggaaatcgcccagggc
aacacggatctcagccagcgtaccgaagagcaagcggcctcactggaagaaaccgcctcc
agcatggaacagatgaccgcgaccgtgaagcaaagcgccgaaaatgccaccctggccaac
aagctggcccaggaggccagtaacaaggccaaccacggcggcaaggtggtcaagcaagcc
gtgtcggccatggaagccatcaatgactccagcaaacgcatcgccgatatcattagcgtc
atagatgaaatcgccttccagaccaacctgttggcgctcaatgccgcggtggaagccgcc
cgcgccggtgagcagggccgcggttttgccgtggtggccggtgaagtacgcaacctggcc
cagcgcagtgccggtgccgcaaaggaaatcaaggaattgatccgcgacagcgtgaacaag
gtcaacgacggcacctcgctggtgaatcaatccggctcgaccctgcaggaaatagtccag
gccgtatccaaggtggccgatatgataagccagataagcatagccgccgagcagcaggct
tccgggatccaggaagttaacaaggccgtcgcccaaatggatgaaatgacccaacaaaac
gcagccctggtggaggaggtgtccgccgccggtgatgccatggccgagcaggcccgcaat
atgaaacgtcagctgggctttttcagaaccgcggagcatgccgccgcgccactggcgctg
gtatccggcgataagcgtccggtggccagtttcaaggctagcaaggaggaatggcacgaa
ttctaa
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